Literature DB >> 9482851

Integration of the Tetrahymena group I intron into bacterial rRNA by reverse splicing in vivo.

J Roman1, S A Woodson.   

Abstract

Horizontal gene transfer is thought to contribute to the wide distribution of group I introns among organisms. Integration of an intron into foreign RNA or DNA by reverse self-splicing, followed by reverse transcription and recombination, could lead to its transposition. Reverse self-splicing of group I introns has been demonstrated in vitro, but not in vivo. Here we report RNA-dependent integration of the Tetrahymena intron into the 23S rRNA in Escherichia coli. Analysis of products by Northern blot and reverse transcription-PCR amplification revealed precise intron insertion into a site homologous to the natural splice junction. Products are sensitive to treatment with RNase but not DNase and depend on the splicing activity of the intron. Partial reaction with 11 novel sites in the 23S RNA that are complementary to the guide sequence of the intron illustrates lower specificity than intron homing. Reverse splicing of the Tetrahymena intron in bacteria demonstrates the possibility of RNA-catalyzed transposition of group I introns in foreign hosts.

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Year:  1998        PMID: 9482851      PMCID: PMC19274          DOI: 10.1073/pnas.95.5.2134

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  29 in total

1.  The guanosine binding site of the Tetrahymena ribozyme.

Authors:  F Michel; M Hanna; R Green; D P Bartel; J W Szostak
Journal:  Nature       Date:  1989-11-23       Impact factor: 49.962

Review 2.  On the origin of RNA splicing and introns.

Authors:  P A Sharp
Journal:  Cell       Date:  1985-09       Impact factor: 41.582

Review 3.  Group I introns as mobile genetic elements: facts and mechanistic speculations--a review.

Authors:  B Dujon
Journal:  Gene       Date:  1989-10-15       Impact factor: 3.688

4.  An Escherichia coli vector to express and purify foreign proteins by fusion to and separation from maltose-binding protein.

Authors:  C V Maina; P D Riggs; A G Grandea; B E Slatko; L S Moran; J A Tagliamonte; L A McReynolds; C D Guan
Journal:  Gene       Date:  1988-12-30       Impact factor: 3.688

5.  RNA structure, not sequence, determines the 5' splice-site specificity of a group I intron.

Authors:  J A Doudna; B P Cormack; J W Szostak
Journal:  Proc Natl Acad Sci U S A       Date:  1989-10       Impact factor: 11.205

6.  Reverse self-splicing of the tetrahymena group I intron: implication for the directionality of splicing and for intron transposition.

Authors:  S A Woodson; T R Cech
Journal:  Cell       Date:  1989-04-21       Impact factor: 41.582

7.  Association of a group I intron with its splice junction in 50S ribosomes: implications for intron toxicity.

Authors:  T Nikolcheva; S A Woodson
Journal:  RNA       Date:  1997-09       Impact factor: 4.942

8.  The conserved U.G pair in the 5' splice site duplex of a group I intron is required in the first but not the second step of self-splicing.

Authors:  E T Barfod; T R Cech
Journal:  Mol Cell Biol       Date:  1989-09       Impact factor: 4.272

Review 9.  Self-splicing RNA: implications for evolution.

Authors:  T R Cech
Journal:  Int Rev Cytol       Date:  1985

10.  Secondary structure model for 23S ribosomal RNA.

Authors:  H F Noller; J Kop; V Wheaton; J Brosius; R R Gutell; A M Kopylov; F Dohme; W Herr; D A Stahl; R Gupta; C R Waese
Journal:  Nucleic Acids Res       Date:  1981-11-25       Impact factor: 16.971

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  26 in total

1.  Refolding of rRNA exons enhances dissociation of the Tetrahymena intron.

Authors:  Y Cao; S A Woodson
Journal:  RNA       Date:  2000-09       Impact factor: 4.942

Review 2.  Barriers to intron promiscuity in bacteria.

Authors:  D R Edgell; M Belfort; D A Shub
Journal:  J Bacteriol       Date:  2000-10       Impact factor: 3.490

3.  Complex evolutionary patterns of tRNA Leu(UAA) group I introns in the cyanobacterial radiation [corrected].

Authors:  K Rudi; K S Jakobsen
Journal:  J Bacteriol       Date:  1999-06       Impact factor: 3.490

4.  The spread of LAGLIDADG homing endonuclease genes in rDNA.

Authors:  Peik Haugen; Debashish Bhattacharya
Journal:  Nucleic Acids Res       Date:  2004-04-06       Impact factor: 16.971

5.  Divergent histories of rDNA group I introns in the lichen family Physciaceae.

Authors:  Dawn Simon; Jessica Moline; Gert Helms; Thomas Friedl; Debashish Bhattacharya
Journal:  J Mol Evol       Date:  2005-04       Impact factor: 2.395

6.  Variability of nuclear SSU-rDNA group introns within Septoria species: incongruence with host sequence phylogenies.

Authors:  Nicolas Feau; Richard C Hamelin; Louis Bernier
Journal:  J Mol Evol       Date:  2007-04-24       Impact factor: 2.395

7.  The unusual 23S rRNA gene of Coxiella burnetii: two self-splicing group I introns flank a 34-base-pair exon, and one element lacks the canonical omegaG.

Authors:  Rahul Raghavan; Scott R Miller; Linda D Hicks; Michael F Minnick
Journal:  J Bacteriol       Date:  2007-07-20       Impact factor: 3.490

Review 8.  Group I introns and inteins: disparate origins but convergent parasitic strategies.

Authors:  Rahul Raghavan; Michael F Minnick
Journal:  J Bacteriol       Date:  2009-08-07       Impact factor: 3.490

9.  Unexpected abundance of self-splicing introns in the genome of bacteriophage Twort: introns in multiple genes, a single gene with three introns, and exon skipping by group I ribozymes.

Authors:  M Landthaler; D A Shub
Journal:  Proc Natl Acad Sci U S A       Date:  1999-06-08       Impact factor: 11.205

10.  Evaluating group I intron catalytic efficiency in mammalian cells.

Authors:  M B Long; B A Sullenger
Journal:  Mol Cell Biol       Date:  1999-10       Impact factor: 4.272

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