Literature DB >> 9477942

Autocatalytic peptide bond cleavages in prothrombin and meizothrombin.

R J Petrovan1, J W Govers-Riemslag, G Nowak, H C Hemker, G Tans, J Rosing.   

Abstract

During factor Xa-catalyzed prothrombin activation, several other reaction products accumulate as a result of proteolysis of prothrombin and its activation products by thrombin and meizothrombin. Gel electrophoretic analysis and N-terminal sequencing of reaction products showed that in the absence of Ca2+ ions thrombin cleaved the following peptide bonds: Arg51-Thr52/Arg54-Asp55 in the fragment 1 (F1) domain (k = 0.4 x 10(4) M-1 s-1), Arg155-Ser156 in prothrombin (k = 2 x 10(4) M-1 s-1), and Arg284-Thr285 in prethrombin 1 (k = 0.02 x 10(4) M-1 s-1). In the presence of 2.5 mM CaCl2, cleavage in fragment 1 (Arg51-Thr52/Arg54-Asp55) was not detectable, whereas cleavage at Arg155-Ser156 (i.e., removal of F1) was inhibited 25-fold. Cleavage at Arg284-Thr285 (formation of prethrombin 2 des-1-13) was not affected by the presence of Ca2+ ions. Meizothrombin rapidly converted itself into meizothrombin des-F1. The half-life (t1/2 = approximately 30 s) of this reaction was independent of the meizothrombin concentration (0.1-1 microM meizothrombin), which is indicative for intramolecular autocatalysis (k = 0.02 s-1 in the presence of 2.5 mM Ca2+ ions). Since the rapid removal of fragment 1 precludes investigations of the cleavage at Arg284-Thr285 in intact meizothrombin, we analyzed the cleavage of this peptide bond in R155A-meizothrombin, a recombinant product that is resistant to autocatalytic removal of the fragment 1 domain. In the absence of phospholipids, R155A-meizothrombin converted itself into thrombin des-1-13 by a combination of intramolecular (k = 0.8 x 10(-4) s-1) and intermolecular autocatalysis (k = 0.2 x 10(3) M-1 s-1). Intramolecular autocatalytic conversion of R155A-meizothrombin into thrombin was not affected by the presence of phospholipids (k = 0.8 x 10(-4) s-1), whereas intermolecular autocatalysis was accelerated 25-fold (k = 5.6 x 10(3) M-1 s-1) by phospholipid vesicles. Since factor Xa/Va-catalyzed conversion of meizothrombin into thrombin occurs with k = 5.5 x 10(8) M-1 s-1, we conclude that in reaction systems containing purified proteins autocatalysis of meizothrombin hardly contributes to thrombin formation during factor Xa-catalyzed prothrombin activation.

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Year:  1998        PMID: 9477942     DOI: 10.1021/bi971948h

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  16 in total

1.  Dilutional control of prothrombin activation at physiologically relevant shear rates.

Authors:  Laura M Haynes; Yves C Dubief; Thomas Orfeo; Kenneth G Mann
Journal:  Biophys J       Date:  2011-02-02       Impact factor: 4.033

2.  Effect of zymogen domains and active site occupation on activation of prothrombin by von Willebrand factor-binding protein.

Authors:  Heather K Kroh; Paul E Bock
Journal:  J Biol Chem       Date:  2012-09-25       Impact factor: 5.157

3.  Crystallization and X-ray structure analysis of a thermostable penicillin G acylase from Alcaligenes faecalis.

Authors:  Nishant Kumar Varshney; R Suresh Kumar; Zoya Ignatova; Asmita Prabhune; Archana Pundle; Eleanor Dodson; C G Suresh
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-02-15

4.  TAILS N-terminomics and proteomics reveal complex regulation of proteolytic cleavage by O-glycosylation.

Authors:  Sarah L King; Christoffer K Goth; Ulrich Eckhard; Hiren J Joshi; Amalie D Haue; Sergey Y Vakhrushev; Katrine T Schjoldager; Christopher M Overall; Hans H Wandall
Journal:  J Biol Chem       Date:  2018-03-28       Impact factor: 5.157

5.  Cloning, overexpression, crystallization and preliminary X-ray crystallographic analysis of a slow-processing mutant of penicillin G acylase from Kluyvera citrophila.

Authors:  Nishant Kumar Varshney; Sureshkumar Ramasamy; James A Brannigan; Anthony J Wilkinson; C G Suresh
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-07-27

6.  Autocatalytic backbone N-methylation in a family of ribosomal peptide natural products.

Authors:  Niels S van der Velden; Noemi Kälin; Maximilian J Helf; Jörn Piel; Michael F Freeman; Markus Künzler
Journal:  Nat Chem Biol       Date:  2017-06-05       Impact factor: 15.040

7.  Na+ binding to meizothrombin desF1.

Authors:  M E Papaconstantinou; P S Gandhi; Z Chen; A Bah; E Di Cera
Journal:  Cell Mol Life Sci       Date:  2008-11       Impact factor: 9.261

8.  Crystal structure of prothrombin reveals conformational flexibility and mechanism of activation.

Authors:  Nicola Pozzi; Zhiwei Chen; David W Gohara; Weiling Niu; Tomasz Heyduk; Enrico Di Cera
Journal:  J Biol Chem       Date:  2013-06-17       Impact factor: 5.157

9.  Molecular dynamics simulations of Factor Xa: insight into conformational transition of its binding subsites.

Authors:  Narender Singh; James M Briggs
Journal:  Biopolymers       Date:  2008-12       Impact factor: 2.505

10.  Prothrombin activation by platelet-associated prothrombinase proceeds through the prethrombin-2 pathway via a concerted mechanism.

Authors:  Laura M Haynes; Beth A Bouchard; Paula B Tracy; Kenneth G Mann
Journal:  J Biol Chem       Date:  2012-09-18       Impact factor: 5.157

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