Literature DB >> 22442220

Crystallization and X-ray structure analysis of a thermostable penicillin G acylase from Alcaligenes faecalis.

Nishant Kumar Varshney1, R Suresh Kumar, Zoya Ignatova, Asmita Prabhune, Archana Pundle, Eleanor Dodson, C G Suresh.   

Abstract

The enzyme penicillin G acylase (EC 3.5.1.11) catalyzes amide-bond cleavage in benzylpenicillin (penicillin G) to yield 6-aminopenicillanic acid, an intermediate chemical used in the production of semisynthetic penicillins. A thermostable penicillin G acylase from Alcaligenes faecalis (AfPGA) has been crystallized using the hanging-drop vapour-diffusion method in two different space groups: C222(1), with unit-cell parameters a = 72.9, b = 86.0, c = 260.2 , and P4(1)2(1)2, with unit-cell parameters a = b = 85.6, c = 298.8 . Data were collected at 293 and the structure was determined using the molecular-replacement method. Like other penicillin acylases, AfPGA belongs to the N-terminal nucleophilic hydrolase superfamily, has undergone post-translational processing and has a serine as the N-terminal residue of the β-chain. A disulfide bridge has been identified in the structure that was not found in the other two known penicillin G cylase structures. The presence of the disulfide bridge is perceived to be one factor that confers higher stability to this enzyme.
© 2012 International Union of Crystallography

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22442220      PMCID: PMC3310528          DOI: 10.1107/S1744309111053930

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  32 in total

1.  Characterization of the beta-lactam binding site of penicillin acylase of Escherichia coli by structural and site-directed mutagenesis studies.

Authors:  W B Alkema; C M Hensgens; E H Kroezinga; E de Vries; R Floris; J M van der Laan; B W Dijkstra; D B Janssen
Journal:  Protein Eng       Date:  2000-12

2.  Penicillin V acylase crystal structure reveals new Ntn-hydrolase family members.

Authors:  C G Suresh; A V Pundle; H SivaRaman; K N Rao; J A Brannigan; C E McVey; C S Verma; Z Dauter; E J Dodson; G G Dodson
Journal:  Nat Struct Biol       Date:  1999-05

3.  Advances in enzymatic transformation of penicillins to 6-aminopenicillanic acid (6-APA).

Authors:  A Parmar; H Kumar; S S Marwaha; J F Kennedy
Journal:  Biotechnol Adv       Date:  2000-07       Impact factor: 14.227

4.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

5.  Capsid assembly in a family of animal viruses primes an autoproteolytic maturation that depends on a single aspartic acid residue.

Authors:  A Zlotnick; V S Reddy; R Dasgupta; A Schneemann; W J Ray; R R Rueckert; J E Johnson
Journal:  J Biol Chem       Date:  1994-05-06       Impact factor: 5.157

6.  Structural and kinetic studies on ligand binding in wild-type and active-site mutants of penicillin acylase.

Authors:  Wynand B L Alkema; Charles M H Hensgens; Harm J Snijder; Evelien Keizer; Bauke W Dijkstra; Dick B Janssen
Journal:  Protein Eng Des Sel       Date:  2004-07-14       Impact factor: 1.650

7.  Role of alphaArg145 and betaArg263 in the active site of penicillin acylase of Escherichia coli.

Authors:  Wynand B L Alkema; Antoon K Prins; Erik de Vries; Dick B Janssen
Journal:  Biochem J       Date:  2002-07-01       Impact factor: 3.857

8.  Penicillin acylase has a single-amino-acid catalytic centre.

Authors:  H J Duggleby; S P Tolley; C P Hill; E J Dodson; G Dodson; P C Moody
Journal:  Nature       Date:  1995-01-19       Impact factor: 49.962

9.  The Buccaneer software for automated model building. 1. Tracing protein chains.

Authors:  Kevin Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2006-08-19

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

View more
  2 in total

1.  Sequence and structure-based comparative analysis to assess, identify and improve the thermostability of penicillin G acylases.

Authors:  Priyabrata Panigrahi; Deepak Chand; Ruchira Mukherji; Sureshkumar Ramasamy; C G Suresh
Journal:  J Ind Microbiol Biotechnol       Date:  2015-09-29       Impact factor: 3.346

2.  Engineering the substrate specificity of a thermophilic penicillin acylase from thermus thermophilus.

Authors:  Leticia L Torres; Angel Cantero; Mercedes del Valle; Anabel Marina; Fernando López-Gallego; José M Guisán; José Berenguer; Aurelio Hidalgo
Journal:  Appl Environ Microbiol       Date:  2012-12-21       Impact factor: 4.792

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.