Literature DB >> 9473045

Ordered cloned DNA map of the genome of Vibrio cholerae 569B and localization of genetic markers.

S Chatterjee1, A K Mondal, N A Begum, S Roychoudhury, J Das.   

Abstract

By using a low-resolution macrorestriction map as the foundation (R. Majumder et al., J. Bacteriol. 176:1105-1112, 1996), an ordered cloned DNA map of the 3.2-Mb chromosome of the hypertoxinogenic strain 569B of Vibrio cholerae has been constructed. A cosmid library the size of about 4,000 clones containing more than 120 Mb of V. cholerae genomic DNA (40-genome equivalent) was generated. By combining landmark analysis and chromosome walking, the cosmid clones were assembled into 13 contigs covering about 90% of the V. cholerae genome. A total of 92 cosmid clones were assigned to the genome and to regions defined by NotI, SfiI, and CeuI macrorestriction maps. Twenty-seven cloned genes, 9 rrn operons, and 10 copies of a repetitive DNA sequence (IS1004) have been positioned on the ordered cloned DNA map.

Entities:  

Mesh:

Substances:

Year:  1998        PMID: 9473045      PMCID: PMC106970     

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  43 in total

1.  A physical map of the Salmonella typhimurium LT2 genome made by using XbaI analysis.

Authors:  S L Liu; K E Sanderson
Journal:  J Bacteriol       Date:  1992-03       Impact factor: 3.490

2.  The secY gene of V. cholerae: identification, cloning and characterization.

Authors:  D Bhattacharyya; J Das
Journal:  Gene       Date:  1997-09-01       Impact factor: 3.688

3.  Detecting and biotyping Vibrio cholerae O1 with multiplex polymerase chain reaction.

Authors:  S P Keasler; R H Hall
Journal:  Lancet       Date:  1993-06-26       Impact factor: 79.321

4.  Emergence of novel strain of Vibrio cholerae with epidemic potential in southern and eastern India.

Authors:  T Ramamurthy; S Garg; R Sharma; S K Bhattacharya; G B Nair; T Shimada; T Takeda; T Karasawa; H Kurazano; A Pal
Journal:  Lancet       Date:  1993-03-13       Impact factor: 79.321

5.  An ordered collection of Bacillus subtilis DNA segments cloned in yeast artificial chromosomes.

Authors:  V Azevedo; E Alvarez; E Zumstein; G Damiani; V Sgaramella; S D Ehrlich; P Serror
Journal:  Proc Natl Acad Sci U S A       Date:  1993-07-01       Impact factor: 11.205

6.  Chromosomal structure of Rhodobacter capsulatus strain SB1003: cosmid encyclopedia and high-resolution physical and genetic map.

Authors:  M Fonstein; R Haselkorn
Journal:  Proc Natl Acad Sci U S A       Date:  1993-03-15       Impact factor: 11.205

7.  Global regulation of gene expression in Escherichia coli.

Authors:  S E Chuang; D L Daniels; F R Blattner
Journal:  J Bacteriol       Date:  1993-04       Impact factor: 3.490

8.  CTX genetic element encodes a site-specific recombination system and an intestinal colonization factor.

Authors:  G D Pearson; A Woods; S L Chiang; J J Mekalanos
Journal:  Proc Natl Acad Sci U S A       Date:  1993-04-15       Impact factor: 11.205

9.  Accessory cholera enterotoxin (Ace), the third toxin of a Vibrio cholerae virulence cassette.

Authors:  M Trucksis; J E Galen; J Michalski; A Fasano; J B Kaper
Journal:  Proc Natl Acad Sci U S A       Date:  1993-06-01       Impact factor: 11.205

10.  Use of an ordered cosmid library to deduce the genomic organization of Mycobacterium leprae.

Authors:  K Eiglmeier; N Honoré; S A Woods; B Caudron; S T Cole
Journal:  Mol Microbiol       Date:  1993-01       Impact factor: 3.501

View more
  7 in total

1.  Vibrio cholerae O139 Bengal: combined physical and genetic map and comparative analysis with the genome of V. cholerae O1.

Authors:  G Khetawat; R K Bhadra; S Kar; J Das
Journal:  J Bacteriol       Date:  1998-09       Impact factor: 3.490

2.  Characterization of vibrio cholerae O1 antigen as the bacteriophage K139 receptor and identification of IS1004 insertions aborting O1 antigen biosynthesis.

Authors:  J Nesper; D Kapfhammer; K E Klose; H Merkert; J Reidl
Journal:  J Bacteriol       Date:  2000-09       Impact factor: 3.490

3.  Sequence Polymorphisms in Vibrio cholerae HapR Affect Biofilm Formation under Aerobic and Anaerobic Conditions.

Authors:  Jant Cres Caigoy; Toshi Shimamoto; Asish Kumar Mukhopadhyay; Sumio Shinoda; Tadashi Shimamoto
Journal:  Appl Environ Microbiol       Date:  2022-08-15       Impact factor: 5.005

4.  Molecular diversification in the quorum-sensing system of Vibrio cholerae: Role of natural selection in the emergence of pandemic strains.

Authors:  Nina M Talyzina; Pär K Ingvarsson; Jun Zhu; Sun N Wai; Agneta Andersson
Journal:  Appl Environ Microbiol       Date:  2009-04-03       Impact factor: 4.792

5.  The mutK gene of Vibrio cholerae: a new gene involved in DNA mismatch repair.

Authors:  K K Bhakat; S M Sudarshana; J Das
Journal:  J Bacteriol       Date:  1999-02       Impact factor: 3.490

6.  Outer Membrane Vesicle-Mediated Export of Processed PrtV Protease from Vibrio cholerae.

Authors:  Pramod K Rompikuntal; Svitlana Vdovikova; Marylise Duperthuy; Tanya L Johnson; Monika Åhlund; Richard Lundmark; Jan Oscarsson; Maria Sandkvist; Bernt Eric Uhlin; Sun Nyunt Wai
Journal:  PLoS One       Date:  2015-07-29       Impact factor: 3.240

Review 7.  Microbial Communities Associated With Indigo Fermentation That Thrive in Anaerobic Alkaline Environments.

Authors:  Keiichi Aino; Kikue Hirota; Takahiro Okamoto; Zhihao Tu; Hidetoshi Matsuyama; Isao Yumoto
Journal:  Front Microbiol       Date:  2018-09-18       Impact factor: 5.640

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.