Literature DB >> 9453159

A reliable amplification technique for the characterization of genomic DNA sequences flanking insertion sequences.

G Prod'hom1, B Lagier, V Pelicic, A J Hance, B Gicquel, C Guilhot.   

Abstract

A simple and efficient ligation-mediated PCR (LMPCR) is described for amplifying DNA adjacent to known sequences. The method uses one primer specific for the known sequence and a second specific for a synthetic linker ligated to restricted genomic DNA. Perkin-Elmer AmpliTaq Gold polymerase is used to minimize non-specific primer annealing and amplification. This LMPCR method was successfully applied to isolate DNA sequences flanking mobile elements present in mycobacterial mutants generated by transposon mutagenesis.

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Year:  1998        PMID: 9453159     DOI: 10.1111/j.1574-6968.1998.tb12803.x

Source DB:  PubMed          Journal:  FEMS Microbiol Lett        ISSN: 0378-1097            Impact factor:   2.742


  37 in total

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Journal:  Genetics       Date:  1999-11       Impact factor: 4.562

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Journal:  Nucleic Acids Res       Date:  2000-12-01       Impact factor: 16.971

4.  Signature-tagged transposon mutagenesis identifies novel Mycobacterium tuberculosis genes involved in the parasitism of human macrophages.

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Journal:  Infect Immun       Date:  2006-10-09       Impact factor: 3.441

5.  LppX is a lipoprotein required for the translocation of phthiocerol dimycocerosates to the surface of Mycobacterium tuberculosis.

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7.  SigF controls carotenoid pigment production and affects transformation efficiency and hydrogen peroxide sensitivity in Mycobacterium smegmatis.

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8.  Conjugative transfer between Escherichia coli and Leptospira spp. as a new genetic tool.

Authors:  Mathieu Picardeau
Journal:  Appl Environ Microbiol       Date:  2007-11-09       Impact factor: 4.792

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Journal:  Antimicrob Agents Chemother       Date:  2008-05-05       Impact factor: 5.191

10.  Introduction of the foreign transposon Tn4560 in Streptomyces coelicolor leads to genetic instability near the native insertion sequence IS1649.

Authors:  Elizabeth M Widenbrant; Camilla M Kao
Journal:  J Bacteriol       Date:  2007-10-19       Impact factor: 3.490

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