Literature DB >> 9446573

CobD, a novel enzyme with L-threonine-O-3-phosphate decarboxylase activity, is responsible for the synthesis of (R)-1-amino-2-propanol O-2-phosphate, a proposed new intermediate in cobalamin biosynthesis in Salmonella typhimurium LT2.

K R Brushaber1, G A O'Toole, J C Escalante-Semerena.   

Abstract

The cobD gene of Salmonella typhimurium LT2 has been cloned, sequenced, and overexpressed. The overexpressed protein had a molecular mass of approximately 40 kDa, in agreement with the mass predicted by the deduced amino acid sequence (40.8 kDa). Computer analysis of the deduced amino acid sequence of CobD identified a consensus pyridoxal phosphate-binding motif. The role of CobD in cobalamin biosynthesis in this bacterium has been established. CobD was shown to decarboxylate L-threonine O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate. We propose that the latter is a substrate in the reaction catalyzed by the CbiB enzyme proposed to be responsible for the conversion of adenosylcobyric acid to adenosylcobinamide and that the product of the reaction is adenosylcobinamide phosphate, not adenosylcobinamide as previously thought. The implications of these findings are discussed in light of the demonstrated kinase activity of the CobU enzyme (O'Toole, G. A., and Escalante-Semerena, J. C. (1995) J. Biol. Chem. 270, 23560-23569) responsible for the conversion of adenosylcobinamide to adenosylcobinamide phosphate. These findings shed light on the strategy used by this bacterium for the assimilation of exogenous unphosphorylated cobinamide from its environment. To our knowledge, CobD is the first enzyme reported to have L-threonine-O-3-phosphate decarboxylase activity, and computer analysis of its amino acid sequence suggests that it may be a member of a new class of pyridoxal phosphate-dependent decarboxylases.

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Year:  1998        PMID: 9446573     DOI: 10.1074/jbc.273.5.2684

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  23 in total

1.  The cbiS gene of the archaeon Methanopyrus kandleri AV19 encodes a bifunctional enzyme with adenosylcobinamide amidohydrolase and alpha-ribazole-phosphate phosphatase activities.

Authors:  Jesse D Woodson; Jorge C Escalante-Semerena
Journal:  J Bacteriol       Date:  2006-06       Impact factor: 3.490

Review 2.  A genomic overview of pyridoxal-phosphate-dependent enzymes.

Authors:  Riccardo Percudani; Alessio Peracchi
Journal:  EMBO Rep       Date:  2003-09       Impact factor: 8.807

3.  The Methanosarcina mazei MM2060 Gene Encodes a Bifunctional Kinase/Decarboxylase Enzyme Involved in Cobamide Biosynthesis.

Authors:  Norbert K Tavares; Carmen L Zayas; Jorge C Escalante-Semerena
Journal:  Biochemistry       Date:  2018-07-13       Impact factor: 3.162

4.  The genome of Rhodobacter sphaeroides strain 2.4.1 encodes functional cobinamide salvaging systems of archaeal and bacterial origins.

Authors:  Michael J Gray; Norbert K Tavares; Jorge C Escalante-Semerena
Journal:  Mol Microbiol       Date:  2008-09-18       Impact factor: 3.501

5.  Exogenous or L-rhamnose-derived 1,2-propanediol is metabolized via a pduD-dependent pathway in Listeria innocua.

Authors:  Junfeng Xue; Charles M Murrieta; Daniel C Rule; Kurt W Miller
Journal:  Appl Environ Microbiol       Date:  2008-09-19       Impact factor: 4.792

6.  The SMUL_1544 Gene Product Governs Norcobamide Biosynthesis in the Tetrachloroethene-Respiring Bacterium Sulfurospirillum multivorans.

Authors:  Sebastian Keller; Aaron Treder; Stephan H von Reuss; Jorge C Escalante-Semerena; Torsten Schubert
Journal:  J Bacteriol       Date:  2016-07-28       Impact factor: 3.490

7.  The cobY gene of the archaeon Halobacterium sp. strain NRC-1 is required for de novo cobamide synthesis.

Authors:  J D Woodson; R F Peck; M P Krebs; J C Escalante-Semerena
Journal:  J Bacteriol       Date:  2003-01       Impact factor: 3.490

8.  SearchDOGS bacteria, software that provides automated identification of potentially missed genes in annotated bacterial genomes.

Authors:  Seán S Óhéigeartaigh; David Armisén; Kevin P Byrne; Kenneth H Wolfe
Journal:  J Bacteriol       Date:  2014-03-21       Impact factor: 3.490

9.  Deciphering the late biosynthetic steps of antimalarial compound FR-900098.

Authors:  Tyler W Johannes; Matthew A DeSieno; Benjamin M Griffin; Paul M Thomas; Neil L Kelleher; William W Metcalf; Huimin Zhao
Journal:  Chem Biol       Date:  2010-01-29

10.  The CbiB protein of Salmonella enterica is an integral membrane protein involved in the last step of the de novo corrin ring biosynthetic pathway.

Authors:  Carmen L Zayas; Kathy Claas; Jorge C Escalante-Semerena
Journal:  J Bacteriol       Date:  2007-09-07       Impact factor: 3.490

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