Literature DB >> 9442891

Gene amplification and genomic plasticity in prokaryotes.

D Romero1, R Palacios.   

Abstract

Gene amplification is a common feature of the genome of prokaryotic organisms. In this review, we analyze different instances of gene amplification in a variety of prokaryotes, including their mechanisms of generation and biological role. Growing evidence supports the concept that gene amplification be considered not as a mutation but rather as a dynamic genomic state related to the adaptation of bacterial populations to changing environmental conditions or biological interactions. In this context, the potentially amplifiable DNA regions impose a defined dynamic structure on the genome. If such structure has indeed been selected during evolution, it is a particularly challenging hypothesis.

Mesh:

Year:  1997        PMID: 9442891     DOI: 10.1146/annurev.genet.31.1.91

Source DB:  PubMed          Journal:  Annu Rev Genet        ISSN: 0066-4197            Impact factor:   16.830


  84 in total

1.  Substitution, insertion, deletion, suppression, and altered substrate specificity in functional protocatechuate 3,4-dioxygenases.

Authors:  D A D'Argenio; M W Vetting; D H Ohlendorf; L N Ornston
Journal:  J Bacteriol       Date:  1999-10       Impact factor: 3.490

Review 2.  Mechanisms of stationary phase mutation: a decade of adaptive mutation.

Authors:  P L Foster
Journal:  Annu Rev Genet       Date:  1999       Impact factor: 16.830

3.  Recombination enhancement by replication (RER) in Rhizobium etli.

Authors:  E Valencia-Morales; D Romero
Journal:  Genetics       Date:  2000-03       Impact factor: 4.562

Review 4.  Transposons and genome evolution in plants.

Authors:  N Fedoroff
Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-20       Impact factor: 11.205

Review 5.  Genome evolution in polyploids.

Authors:  J F Wendel
Journal:  Plant Mol Biol       Date:  2000-01       Impact factor: 4.076

6.  Origin and fate of repeats in bacteria.

Authors:  G Achaz; E P C Rocha; P Netter; E Coissac
Journal:  Nucleic Acids Res       Date:  2002-07-01       Impact factor: 16.971

7.  An appraisal of the potential for illegitimate recombination in bacterial genomes and its consequences: from duplications to genome reduction.

Authors:  Eduardo P C Rocha
Journal:  Genome Res       Date:  2003-05-12       Impact factor: 9.043

8.  Associations between inverted repeats and the structural evolution of bacterial genomes.

Authors:  Guillaume Achaz; Eric Coissac; Pierre Netter; Eduardo P C Rocha
Journal:  Genetics       Date:  2003-08       Impact factor: 4.562

9.  Naturally mosaic operons for secondary metabolite biosynthesis: variability and putative horizontal transfer of discrete catalytic domains of the epothilone polyketide synthase locus.

Authors:  J V Lopez
Journal:  Mol Genet Genomics       Date:  2003-11-01       Impact factor: 3.291

10.  DNA amplification and rearrangements in archival Salmonella enterica serovar Typhimurium LT2 cultures.

Authors:  Steffen Porwollik; Rita Mei-Yee Wong; R Allen Helm; Kelly K Edwards; Michael Calcutt; Abraham Eisenstark; Michael McClelland
Journal:  J Bacteriol       Date:  2004-03       Impact factor: 3.490

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