Literature DB >> 9399871

The ribonuclease P database.

J W Brown1.   

Abstract

Ribonuclease P is responsible for the 5'-maturation of tRNA precursors. Ribonuclease P is a ribonucleoprotein, and in bacteria the RNA subunit alone is catalytically active in vitro , i.e., it is a ribozyme. The Ribonuclease P Database is a compilation of ribonuclease P sequences, sequence alignments, secondary structures, three-dimensional models, and accessory information, available via the World Wide Web (http: //www.mbio.ncsu.edu/RNaseP/home.html ).

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Year:  1998        PMID： 9399871      PMCID： PMC147188          DOI： 10.1093/nar/26.1.351

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  3 in total

1.  Ribonuclease P RNA and protein subunits from bacteria.

Authors:  J W Brown; N R Pace
Journal:  Nucleic Acids Res       Date:  1992-04-11       Impact factor: 16.971

Review 2.  Evolutionary perspective on the structure and function of ribonuclease P, a ribozyme.

Authors:  N R Pace; J W Brown
Journal:  J Bacteriol       Date:  1995-04       Impact factor: 3.490

3.  The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme.

Authors:  C Guerrier-Takada; K Gardiner; T Marsh; N Pace; S Altman
Journal:  Cell       Date:  1983-12       Impact factor: 41.582
  3 in total
  32 in total

1.  Comparative sequence analysis and patterns of covariation in RNA secondary structures.

Authors:  J Parsch; J M Braverman; W Stephan
Journal:  Genetics       Date:  2000-02       Impact factor: 4.562

2.  TurboKnot: rapid prediction of conserved RNA secondary structures including pseudoknots.

Authors:  Matthew G Seetin; David H Mathews
Journal:  Bioinformatics       Date:  2012-01-27       Impact factor: 6.937

3.  ProbKnot: fast prediction of RNA secondary structure including pseudoknots.

Authors:  Stanislav Bellaousov; David H Mathews
Journal:  RNA       Date:  2010-08-10       Impact factor: 4.942

4.  Thermodynamic characterization of naturally occurring RNA tetraloops.

Authors:  Justin P Sheehy; Amber R Davis; Brent M Znosko
Journal:  RNA       Date:  2010-01-04       Impact factor: 4.942

5.  Improved RNA secondary structure prediction by maximizing expected pair accuracy.

Authors:  Zhi John Lu; Jason W Gloor; David H Mathews
Journal:  RNA       Date:  2009-08-24       Impact factor: 4.942

6.  Using reliability information to annotate RNA secondary structures.

Authors:  M Zuker; A B Jacobson
Journal:  RNA       Date:  1998-06       Impact factor: 4.942

7.  Evolutionary variation in bacterial RNase P RNAs.

Authors:  E S Haas; J W Brown
Journal:  Nucleic Acids Res       Date:  1998-09-15       Impact factor: 16.971

8.  Protein component of the ribozyme ribonuclease P alters substrate recognition by directly contacting precursor tRNA.

Authors:  S Niranjanakumari; T Stams; S M Crary; D W Christianson; C A Fierke
Journal:  Proc Natl Acad Sci U S A       Date:  1998-12-22       Impact factor: 11.205

9.  Expression, purification and characterization of the recombinant ribonuclease P protein component from Bacillus subtilis.

Authors:  S Niranjanakumari; J C Kurz; C A Fierke
Journal:  Nucleic Acids Res       Date:  1998-07-01       Impact factor: 16.971

10.  Secondary structure models of the 3' untranslated regions of diverse R2 RNAs.

Authors:  Amy M Ruschak; David H Mathews; Arkadiusz Bibillo; Sherry L Spinelli; Jessica L Childs; Thomas H Eickbush; Douglas H Turner
Journal:  RNA       Date:  2004-06       Impact factor: 4.942
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