Literature DB >> 9399841

aCHEdb: the database system for ESTHER, the alpha/beta fold family of proteins and the Cholinesterase gene server.

X Cousin1, T Hotelier, K Giles, J P Toutant, A Chatonnet.   

Abstract

Acetylcholinesterase belongs to a family of proteins, the alpha/beta hydrolase fold family, whose constituents evolutionarily diverged from a common ancestor and share a similar structure of a central beta sheet surrounded by alpha helices. These proteins fulfil a wide range of physiological functions (hydrolases, adhesion molecules, hormone precursors) [Krejci,E., Duval,N., Chatonnet,A., Vincens,P. and Massoulié,J. (1991) Proc. Natl. Acad. Sci. USA , 88, 6647-6651]. ESTHER (for esterases, alpha/beta hydrolase enzymes and relatives) is a database aimed at collecting in one information system, sequence data together with biological annotations and experimental biochemical results related to the structure-function analysis of the enzymes of the family. The major upgrade of the database comes from the use of a new database management system: aCHEdb which uses the ACeDB program designed by Richard Durbin and Jean Thierry-Mieg. It can be found at http://www.ensam.inra.fr/cholinesterase

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Year:  1998        PMID: 9399841      PMCID: PMC147245          DOI: 10.1093/nar/26.1.226

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  8 in total

1.  The alpha/beta hydrolase fold.

Authors:  D L Ollis; E Cheah; M Cygler; B Dijkstra; F Frolow; S M Franken; M Harel; S J Remington; I Silman; J Schrag
Journal:  Protein Eng       Date:  1992-04

2.  Atomic structure of acetylcholinesterase from Torpedo californica: a prototypic acetylcholine-binding protein.

Authors:  J L Sussman; M Harel; F Frolow; C Oefner; A Goldman; L Toker; I Silman
Journal:  Science       Date:  1991-08-23       Impact factor: 47.728

3.  The alpha/beta fold family of proteins database and the cholinesterase gene server ESTHER.

Authors:  X Cousin; T Hotelier; K Giles; P Lievin; J P Toutant; A Chatonnet
Journal:  Nucleic Acids Res       Date:  1997-01-01       Impact factor: 16.971

4.  Structural patterns in globular proteins.

Authors:  M Levitt; C Chothia
Journal:  Nature       Date:  1976-06-17       Impact factor: 49.962

5.  A cholinesterase genes server (ESTHER): a database of cholinesterase-related sequences for multiple alignments, phylogenetic relationships, mutations and structural data retrieval.

Authors:  X Cousin; T Hotelier; P Liévin; J P Toutant; A Chatonnet
Journal:  Nucleic Acids Res       Date:  1996-01-01       Impact factor: 16.971

6.  Ser-His-Glu triad forms the catalytic site of the lipase from Geotrichum candidum.

Authors:  J D Schrag; Y G Li; S Wu; M Cygler
Journal:  Nature       Date:  1991-06-27       Impact factor: 49.962

7.  Fusarium solani cutinase is a lipolytic enzyme with a catalytic serine accessible to solvent.

Authors:  C Martinez; P De Geus; M Lauwereys; G Matthyssens; C Cambillau
Journal:  Nature       Date:  1992-04-16       Impact factor: 49.962

8.  Cutinase, a lipolytic enzyme with a preformed oxyanion hole.

Authors:  C Martinez; A Nicolas; H van Tilbeurgh; M P Egloff; C Cudrey; R Verger; C Cambillau
Journal:  Biochemistry       Date:  1994-01-11       Impact factor: 3.162

  8 in total
  11 in total

1.  Degradation of lipid vesicles in the yeast vacuole requires function of Cvt17, a putative lipase.

Authors:  S A Teter; K P Eggerton; S V Scott; J Kim; A M Fischer; D J Klionsky
Journal:  J Biol Chem       Date:  2000-11-20       Impact factor: 5.157

2.  Maspardin is mutated in mast syndrome, a complicated form of hereditary spastic paraplegia associated with dementia.

Authors:  Michael A Simpson; Harold Cross; Christos Proukakis; Anna Pryde; Ruth Hershberger; Arnaud Chatonnet; Michael A Patton; Andrew H Crosby
Journal:  Am J Hum Genet       Date:  2003-10-16       Impact factor: 11.025

3.  ESTHER, the database of the alpha/beta-hydrolase fold superfamily of proteins.

Authors:  Thierry Hotelier; Ludovic Renault; Xavier Cousin; Vincent Negre; Pascale Marchot; Arnaud Chatonnet
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

4.  TropGENE-DB, a multi-tropical crop information system.

Authors:  Manuel Ruiz; Mathieu Rouard; Louis Marie Raboin; Marc Lartaud; Pierre Lagoda; Brigitte Courtois
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

5.  Multivariate statistical analysis of sensitivity of cholinesterases to reversible inhibitors.

Authors:  A Y Perchenok; S N Moralev
Journal:  Dokl Biochem Biophys       Date:  2006 Mar-Apr       Impact factor: 0.788

6.  Factor analysis of the sensitivity of insect cholinesterases to irreversible inhibitors and the structure of their active center.

Authors:  S N Moralev
Journal:  Dokl Biochem Biophys       Date:  2009 Mar-Apr       Impact factor: 0.788

7.  A four-to-one association between peptide motifs: four C-terminal domains from cholinesterase assemble with one proline-rich attachment domain (PRAD) in the secretory pathway.

Authors:  S Simon; E Krejci; J Massoulié
Journal:  EMBO J       Date:  1998-11-02       Impact factor: 11.598

8.  A single amino acid change in the acetylcholinesterase-like domain of thyroglobulin causes congenital goiter with hypothyroidism in the cog/cog mouse: a model of human endoplasmic reticulum storage diseases.

Authors:  P S Kim; S A Hossain; Y N Park; I Lee; S E Yoo; P Arvan
Journal:  Proc Natl Acad Sci U S A       Date:  1998-08-18       Impact factor: 11.205

9.  Crystal structure of a novel esterase Rv0045c from Mycobacterium tuberculosis.

Authors:  Xiangdong Zheng; Jiubiao Guo; Lipeng Xu; Honglei Li; Dongwei Zhang; Kai Zhang; Fei Sun; Tingyi Wen; Siguo Liu; Hai Pang
Journal:  PLoS One       Date:  2011-05-26       Impact factor: 3.240

10.  ESTHER, the database of the α/β-hydrolase fold superfamily of proteins: tools to explore diversity of functions.

Authors:  Nicolas Lenfant; Thierry Hotelier; Eric Velluet; Yves Bourne; Pascale Marchot; Arnaud Chatonnet
Journal:  Nucleic Acids Res       Date:  2012-11-27       Impact factor: 16.971

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