Literature DB >> 9398311

General acid/base catalysis in the active site of Escherichia coli thioredoxin.

P T Chivers1, R T Raines.   

Abstract

Enzymic catalysts of thiol:disulfide oxidoreduction contain two cysteine residues in their active sites. Another common residue is an aspartate (or glutamate), the role of which has been unclear. Escherichia coli thioredoxin (Trx) is the best characterized thiol:disulfide oxidoreductase, and in Trx these three active-site residues are Cys32, Cys35, and Asp26. Structural analyses had indicated that the carboxylate of Asp26 is positioned properly for the deprotonation of the thiol of Cys35, which would facilitate its attack on Cys32 in enzyme-substrate mixed disulfides. Here, Asp26 of Trx was replaced with isologous asparagine and leucine residues. D26N Trx and D26L Trx are reduced and oxidized more slowly than is wild-type Trx during catalysis by E.coli thioredoxin reductase. Stopped-flow spectroscopy demonstrated that the cleavage of the mixed disulfide between Trx and a substrate is slower in the D26N and D26L enzymes. Buffers increase the rate of mixed disulfide cleavage in these variants but not in wild-type Trx. These results indicate that Asp26 serves as an acid/base in the oxidation/reduction reactions catalyzed by Trx. Specifically, Asp26 protonates (during substrate oxidation) or deprotonates (during substrate reduction) the thiol of Cys35. A similar role is likely filled by the analogous aspartate (or glutamate) residue in protein disulfide isomerase, DsbA, and other thiol:disulfide oxidoreductases. Moreover, these results provide the first evidence for general acid/base catalysis in a thiol:disulfide interchange reaction.

Entities:  

Mesh:

Substances:

Year:  1997        PMID: 9398311     DOI: 10.1021/bi971504l

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  26 in total

1.  The acidic nature of the CcmG redox-active center is important for cytochrome c maturation in Escherichia coli.

Authors:  Melissa A Edeling; Umesh Ahuja; Begoña Heras; Linda Thöny-Meyer; Jennifer L Martin
Journal:  J Bacteriol       Date:  2004-06       Impact factor: 3.490

2.  Force-clamp spectroscopy detects residue co-evolution in enzyme catalysis.

Authors:  Raul Perez-Jimenez; Arun P Wiita; David Rodriguez-Larrea; Pallav Kosuri; Jose A Gavira; Jose M Sanchez-Ruiz; Julio M Fernandez
Journal:  J Biol Chem       Date:  2008-08-07       Impact factor: 5.157

3.  Protein folding drives disulfide formation.

Authors:  Pallav Kosuri; Jorge Alegre-Cebollada; Jason Feng; Anna Kaplan; Alvaro Inglés-Prieto; Carmen L Badilla; Brent R Stockwell; Jose M Sanchez-Ruiz; Arne Holmgren; Julio M Fernández
Journal:  Cell       Date:  2012-11-09       Impact factor: 41.582

4.  The antibacterial prodrug activator Rv2466c is a mycothiol-dependent reductase in the oxidative stress response of Mycobacterium tuberculosis.

Authors:  Leonardo Astolfi Rosado; Khadija Wahni; Giulia Degiacomi; Brandán Pedre; David Young; Alfonso G de la Rubia; Francesca Boldrin; Edo Martens; Laura Marcos-Pascual; Enea Sancho-Vaello; David Albesa-Jové; Roberta Provvedi; Charlotte Martin; Vadim Makarov; Wim Versées; Guido Verniest; Marcelo E Guerin; Luis M Mateos; Riccardo Manganelli; Joris Messens
Journal:  J Biol Chem       Date:  2017-06-15       Impact factor: 5.157

5.  Characterization of a reduced form of plasma plasminogen as the precursor for angiostatin formation.

Authors:  Diego Butera; Troels Wind; Angelina J Lay; Julia Beck; Francis J Castellino; Philip J Hogg
Journal:  J Biol Chem       Date:  2013-12-12       Impact factor: 5.157

6.  Atomic-resolution crystal structure of thioredoxin from the acidophilic bacterium Acetobacter aceti.

Authors:  Courtney M Starks; Julie A Francois; Kelly M MacArthur; Brittney Z Heard; T Joseph Kappock
Journal:  Protein Sci       Date:  2007-01       Impact factor: 6.725

7.  The CXC motif: a functional mimic of protein disulfide isomerase.

Authors:  Kenneth J Woycechowsky; Ronald T Raines
Journal:  Biochemistry       Date:  2003-05-13       Impact factor: 3.162

8.  Cysteine pKa depression by a protonated glutamic acid in human DJ-1.

Authors:  Anna C Witt; Mahadevan Lakshminarasimhan; Benjamin C Remington; Sahar Hasim; Edwin Pozharski; Mark A Wilson
Journal:  Biochemistry       Date:  2008-06-21       Impact factor: 3.162

9.  Crystal structure and biophysical properties of Bacillus subtilis BdbD. An oxidizing thiol:disulfide oxidoreductase containing a novel metal site.

Authors:  Allister Crow; Allison Lewin; Oliver Hecht; Mirja Carlsson Möller; Geoffrey R Moore; Lars Hederstedt; Nick E Le Brun
Journal:  J Biol Chem       Date:  2009-06-17       Impact factor: 5.157

10.  How thioredoxin dissociates its mixed disulfide.

Authors:  Goedele Roos; Nicolas Foloppe; Koen Van Laer; Lode Wyns; Lennart Nilsson; Paul Geerlings; Joris Messens
Journal:  PLoS Comput Biol       Date:  2009-08-13       Impact factor: 4.475

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.