Literature DB >> 28620052

The antibacterial prodrug activator Rv2466c is a mycothiol-dependent reductase in the oxidative stress response of Mycobacterium tuberculosis.

Leonardo Astolfi Rosado1,2,3, Khadija Wahni1,2,3, Giulia Degiacomi4, Brandán Pedre1,2,3, David Young1,2,3, Alfonso G de la Rubia5, Francesca Boldrin4, Edo Martens1,2,3, Laura Marcos-Pascual5, Enea Sancho-Vaello6,7, David Albesa-Jové6,7,8,9, Roberta Provvedi10, Charlotte Martin11, Vadim Makarov12, Wim Versées1,3, Guido Verniest11, Marcelo E Guerin6,7,8,9, Luis M Mateos5, Riccardo Manganelli13, Joris Messens14,2,3.   

Abstract

The Mycobacterium tuberculosis rv2466c gene encodes an oxidoreductase enzyme annotated as DsbA. It has a CPWC active-site motif embedded within its thioredoxin fold domain and mediates the activation of the prodrug TP053, a thienopyrimidine derivative that kills both replicating and nonreplicating bacilli. However, its mode of action and actual enzymatic function in M. tuberculosis have remained enigmatic. In this study, we report that Rv2466c is essential for bacterial survival under H2O2 stress. Further, we discovered that Rv2466c lacks oxidase activity; rather, it receives electrons through the mycothiol/mycothione reductase/NADPH pathway to activate TP053, preferentially via a dithiol-disulfide mechanism. We also found that Rv2466c uses a monothiol-disulfide exchange mechanism to reduce S-mycothiolated mixed disulfides and intramolecular disulfides. Genetic, phylogenetic, bioinformatics, structural, and biochemical analyses revealed that Rv2466c is a novel mycothiol-dependent reductase, which represents a mycoredoxin cluster of enzymes within the DsbA family different from the glutaredoxin cluster to which mycoredoxin-1 (Mrx1 or Rv3198A) belongs. To validate this DsbA-mycoredoxin cluster, we also characterized a homologous enzyme of Corynebacterium glutamicum (NCgl2339) and observed that it demycothiolates and reduces a mycothiol arsenate adduct with kinetic properties different from those of Mrx1. In conclusion, our work has uncovered a DsbA-like mycoredoxin that promotes mycobacterial resistance to oxidative stress and reacts with free mycothiol and mycothiolated targets. The characterization of the DsbA-like mycoredoxin cluster reported here now paves the way for correctly classifying similar enzymes from other organisms.
© 2017 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  Mycobacterium tuberculosis; enzyme catalysis; oxidation-reduction (redox); oxidative stress; oxidoreductase; phylogenetics; thiol–disulfide exchange

Mesh:

Substances:

Year:  2017        PMID: 28620052      PMCID: PMC5555174          DOI: 10.1074/jbc.M117.797837

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  63 in total

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Journal:  Microbiology       Date:  2000-08       Impact factor: 2.777

2.  Thioredoxin and glutaredoxin isoforms.

Authors:  Alexios Vlamis-Gardikas; Arne Holmgren
Journal:  Methods Enzymol       Date:  2002       Impact factor: 1.600

3.  DMSO-related effects in protein characterization.

Authors:  Agneta Tjernberg; Natalia Markova; William J Griffiths; Dan Hallén
Journal:  J Biomol Screen       Date:  2006-02-20

Review 4.  Advances in the development of new tuberculosis drugs and treatment regimens.

Authors:  Alimuddin Zumla; Payam Nahid; Stewart T Cole
Journal:  Nat Rev Drug Discov       Date:  2013-05       Impact factor: 84.694

5.  The role of the thioredoxin and glutaredoxin pathways in reducing protein disulfide bonds in the Escherichia coli cytoplasm.

Authors:  W A Prinz; F Aslund; A Holmgren; J Beckwith
Journal:  J Biol Chem       Date:  1997-06-20       Impact factor: 5.157

6.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

7.  The reducing activity of glutaredoxin 3 toward cytoplasmic substrate proteins is restricted by methionine 43.

Authors:  Amir Porat; Christopher Horst Lillig; Catrine Johansson; Aristi Potamitou Fernandes; Lennart Nilsson; Arne Holmgren; Jon Beckwith
Journal:  Biochemistry       Date:  2007-02-17       Impact factor: 3.162

8.  General acid/base catalysis in the active site of Escherichia coli thioredoxin.

Authors:  P T Chivers; R T Raines
Journal:  Biochemistry       Date:  1997-12-16       Impact factor: 3.162

9.  The Corynebacterium glutamicum mycothiol peroxidase is a reactive oxygen species-scavenging enzyme that shows promiscuity in thiol redox control.

Authors:  Brandán Pedre; Inge Van Molle; Almudena F Villadangos; Khadija Wahni; Didier Vertommen; Lucía Turell; Huriye Erdogan; Luis M Mateos; Joris Messens
Journal:  Mol Microbiol       Date:  2015-04-11       Impact factor: 3.501

10.  Resazurin microtiter assay plate: simple and inexpensive method for detection of drug resistance in Mycobacterium tuberculosis.

Authors:  Juan-Carlos Palomino; Anandi Martin; Mirtha Camacho; Humberto Guerra; Jean Swings; Françoise Portaels
Journal:  Antimicrob Agents Chemother       Date:  2002-08       Impact factor: 5.191

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  11 in total

1.  Machine Learning Models for Mycobacterium tuberculosis In Vitro Activity: Prediction and Target Visualization.

Authors:  Thomas R Lane; Fabio Urbina; Laura Rank; Jacob Gerlach; Olga Riabova; Alexander Lepioshkin; Elena Kazakova; Anthony Vocat; Valery Tkachenko; Stewart Cole; Vadim Makarov; Sean Ekins
Journal:  Mol Pharm       Date:  2021-12-29       Impact factor: 5.364

2.  Antitubercular Triazines: Optimization and Intrabacterial Metabolism.

Authors:  Xin Wang; Daigo Inoyama; Riccardo Russo; Shao-Gang Li; Ravindra Jadhav; Thomas P Stratton; Nisha Mittal; Joseph A Bilotta; Eric Singleton; Thomas Kim; Steve D Paget; Richard S Pottorf; Yong-Mo Ahn; Alejandro Davila-Pagan; Srinivasan Kandasamy; Courtney Grady; Seema Hussain; Patricia Soteropoulos; Matthew D Zimmerman; Hsin Pin Ho; Steven Park; Véronique Dartois; Sean Ekins; Nancy Connell; Pradeep Kumar; Joel S Freundlich
Journal:  Cell Chem Biol       Date:  2019-11-08       Impact factor: 8.116

3.  Identification of a Mycothiol-Dependent Nitroreductase from Mycobacterium tuberculosis.

Authors:  Ana Negri; Prisca Javidnia; Ran Mu; Xiaojie Zhang; Jeremie Vendome; Ben Gold; Julia Roberts; Dipti Barman; Thomas Ioerger; James C Sacchettini; Xiuju Jiang; Kristin Burns-Huang; Thulasi Warrier; Yan Ling; J David Warren; Deena A Oren; Thijs Beuming; Hongyao Wang; Jie Wu; Haitao Li; Kyu Y Rhee; Carl F Nathan; Gang Liu; Selin Somersan-Karakaya
Journal:  ACS Infect Dis       Date:  2018-02-21       Impact factor: 5.084

4.  Assessing the role of Rv1222 (RseA) as an anti-sigma factor of the Mycobacterium tuberculosis extracytoplasmic sigma factor SigE.

Authors:  Francesca Boldrin; Laura Cioetto Mazzabò; Saber Anoosheh; Giorgio Palù; Luc Gaudreau; Riccardo Manganelli; Roberta Provvedi
Journal:  Sci Rep       Date:  2019-03-14       Impact factor: 4.379

Review 5.  Reactive species and pathogen antioxidant networks during phagocytosis.

Authors:  Lucía Piacenza; Madia Trujillo; Rafael Radi
Journal:  J Exp Med       Date:  2019-02-21       Impact factor: 14.307

6.  Biological Profiling Enables Rapid Mechanistic Classification of Phenotypic Screening Hits and Identification of KatG Activation-Dependent Pyridine Carboxamide Prodrugs With Activity Against Mycobacterium tuberculosis.

Authors:  Melissa D Chengalroyen; Audrey Jordaan; Ronnett Seldon; Thomas Ioerger; Scott G Franzblau; Mohamed Nasr; Digby F Warner; Valerie Mizrahi
Journal:  Front Cell Infect Microbiol       Date:  2020-11-13       Impact factor: 5.293

7.  Mycobacterium tuberculosis VapC4 toxin engages small ORFs to initiate an integrated oxidative and copper stress response.

Authors:  Valdir C Barth; Unnati Chauhan; Jumei Zeng; Xiaoyang Su; Haiyan Zheng; Robert N Husson; Nancy A Woychik
Journal:  Proc Natl Acad Sci U S A       Date:  2021-08-10       Impact factor: 11.205

8.  A novel mycothiol-dependent thiol-disulfide reductase in Corynebacterium glutamicum involving oxidative stress resistance.

Authors:  Yang Liu; Xiaona Li; Jiaxin Luo; Tao Su; Meiru Si; Can Chen
Journal:  3 Biotech       Date:  2021-07-14       Impact factor: 2.406

Review 9.  Redox regulation by reversible protein S-thiolation in Gram-positive bacteria.

Authors:  Marcel Imber; Agnieszka J Pietrzyk-Brzezinska; Haike Antelmann
Journal:  Redox Biol       Date:  2018-08-24       Impact factor: 11.799

10.  Rv0579 Is Involved in the Resistance to the TP053 Antitubercular Prodrug.

Authors:  Giorgia Mori; Beatrice Silvia Orena; Laurent R Chiarelli; Giulia Degiacomi; Olga Riabova; José Camilla Sammartino; Vadim Makarov; Giovanna Riccardi; Maria Rosalia Pasca
Journal:  Front Microbiol       Date:  2020-02-25       Impact factor: 5.640

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