Literature DB >> 9385648

Identification of a novel conserved sequence motif in flavoprotein hydroxylases with a putative dual function in FAD/NAD(P)H binding.

M H Eppink1, H A Schreuder, W J Van Berkel.   

Abstract

A novel conserved sequence motif has been located among the flavoprotein hydroxylases. Based on the crystal structure and site-directed mutagenesis studies of p-hydroxybenzoate hydroxylase (PHBH) from Pseudomonas fluorescens, this amino acid fingerprint sequence is proposed to play a dual function in both FAD and NAD(P)H binding. In PHBH, the novel sequence motif (residues 153-166) includes strand A4 and the N-terminal part of helix H7. The conserved amino acids Asp 159, Gly 160, and Arg 166 are necessary for maintaining the structure. The backbone oxygen of Cys 158 and backbone nitrogens of Gly 160 and Phe 161 interact indirectly with the pyrophosphate moiety of FAD, whereas it is known from mutagenesis studies that the side chain of the moderately conserved His 162 is involved in NADPH binding.

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Year:  1997        PMID: 9385648      PMCID: PMC2143585          DOI: 10.1002/pro.5560061119

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  38 in total

1.  Isolation and characterization of a light-sensitive mutant of Escherichia coli K-12 with a mutation in a gene that is required for the biosynthesis of ubiquinone.

Authors:  K Nakahigashi; K Miyamoto; K Nishimura; H Inokuchi
Journal:  J Bacteriol       Date:  1992-11       Impact factor: 3.490

2.  Amino acid substitution matrices from protein blocks.

Authors:  S Henikoff; J G Henikoff
Journal:  Proc Natl Acad Sci U S A       Date:  1992-11-15       Impact factor: 11.205

3.  A workbench for multiple alignment construction and analysis.

Authors:  G D Schuler; S F Altschul; D J Lipman
Journal:  Proteins       Date:  1991

4.  The coenzyme analogue adenosine 5-diphosphoribose displaces FAD in the active site of p-hydroxybenzoate hydroxylase. An x-ray crystallographic investigation.

Authors:  J M van der Laan; H A Schreuder; M B Swarte; R K Wierenga; K H Kalk; W G Hol; J Drenth
Journal:  Biochemistry       Date:  1989-09-05       Impact factor: 3.162

5.  Rubredoxin reductase of Pseudomonas oleovorans. Structural relationship to other flavoprotein oxidoreductases based on one NAD and two FAD fingerprints.

Authors:  G Eggink; H Engel; G Vriend; P Terpstra; B Witholt
Journal:  J Mol Biol       Date:  1990-03-05       Impact factor: 5.469

6.  Substitution of Arg214 at the substrate-binding site of p-hydroxybenzoate hydroxylase from Pseudomonas fluorescens.

Authors:  W van Berkel; A Westphal; K Eschrich; M Eppink; A de Kok
Journal:  Eur J Biochem       Date:  1992-12-01

7.  Phenol hydroxylase from Trichosporon cutaneum: gene cloning, sequence analysis, and functional expression in Escherichia coli.

Authors:  M Kälin; H Y Neujahr; R N Weissmahr; T Sejlitz; R Jöhl; A Fiechter; J Reiser
Journal:  J Bacteriol       Date:  1992-11       Impact factor: 3.490

8.  Cloning, sequence analysis, and expression of the Flavobacterium pentachlorophenol-4-monooxygenase gene in Escherichia coli.

Authors:  C S Orser; C C Lange; L Xun; T C Zahrt; B J Schneider
Journal:  J Bacteriol       Date:  1993-01       Impact factor: 3.490

9.  The gene encoding squalene epoxidase from Saccharomyces cerevisiae: cloning and characterization.

Authors:  A Jandrositz; F Turnowsky; G Högenauer
Journal:  Gene       Date:  1991-10-30       Impact factor: 3.688

10.  Nucleotide sequence analysis of the Pseudomonas putida PpG7 salicylate hydroxylase gene (nahG) and its 3'-flanking region.

Authors:  I S You; D Ghosal; I C Gunsalus
Journal:  Biochemistry       Date:  1991-02-12       Impact factor: 3.162

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  39 in total

1.  Enantioselective substrate binding in a monooxygenase protein model by molecular dynamics and docking.

Authors:  K Anton Feenstra; Karin Hofstetter; Rolien Bosch; Andreas Schmid; Jan N M Commandeur; Nico P E Vermeulen
Journal:  Biophys J       Date:  2006-08-11       Impact factor: 4.033

2.  Structure-function correlations of two highly conserved motifs in Saccharomyces cerevisiae squalene epoxidase.

Authors:  Christoph Ruckenstuhl; Andrea Poschenel; Reinhard Possert; Pravas Kumar Baral; Karl Gruber; Friederike Turnowsky
Journal:  Antimicrob Agents Chemother       Date:  2008-01-22       Impact factor: 5.191

3.  Crystal structure of 3-hydroxybenzoate 6-hydroxylase uncovers lipid-assisted flavoprotein strategy for regioselective aromatic hydroxylation.

Authors:  Stefania Montersino; Roberto Orru; Arjan Barendregt; Adrie H Westphal; Esther van Duijn; Andrea Mattevi; Willem J H van Berkel
Journal:  J Biol Chem       Date:  2013-07-17       Impact factor: 5.157

4.  Protein and ligand dynamics in 4-hydroxybenzoate hydroxylase.

Authors:  Jian Wang; Mariliz Ortiz-Maldonado; Barrie Entsch; Vincent Massey; David Ballou; Domenico L Gatti
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-22       Impact factor: 11.205

5.  Functional analyses of oxygenases in jadomycin biosynthesis and identification of JadH as a bifunctional oxygenase/dehydrase.

Authors:  Yi-Hua Chen; Chen-Chen Wang; Lisa Greenwell; Uwe Rix; Dirk Hoffmeister; Leo C Vining; Jürgen Rohr; Ke-Qian Yang
Journal:  J Biol Chem       Date:  2005-04-06       Impact factor: 5.157

6.  Analysis of the wild-type and mutant genes encoding the enzyme kynurenine monooxygenase of the yellow fever mosquito, Aedes aegypti.

Authors:  Q Han; E Calvo; O Marinotti; J Fang; M Rizzi; A A James; J Li
Journal:  Insect Mol Biol       Date:  2003-10       Impact factor: 3.585

7.  Novel acetone metabolism in a propane-utilizing bacterium, Gordonia sp. strain TY-5.

Authors:  Tetsuya Kotani; Hiroya Yurimoto; Nobuo Kato; Yasuyoshi Sakai
Journal:  J Bacteriol       Date:  2006-10-27       Impact factor: 3.490

8.  The tryptophan oxidation pathway in mosquitoes with emphasis on xanthurenic acid biosynthesis.

Authors:  Qian Han; Brenda T Beerntsen; Jianyong Li
Journal:  J Insect Physiol       Date:  2006-09-17       Impact factor: 2.354

9.  Flavin-Dependent Monooxygenases NotI and NotI' Mediate Spiro-Oxindole Formation in Biosynthesis of the Notoamides.

Authors:  Amy E Fraley; Hong T Tran; Samantha P Kelly; Sean A Newmister; Ashootosh Tripathi; Hikaru Kato; Sachiko Tsukamoto; Lei Du; Shengying Li; Robert M Williams; David H Sherman
Journal:  Chembiochem       Date:  2020-05-14       Impact factor: 3.164

10.  Identification and characterization of catabolic para-nitrophenol 4-monooxygenase and para-benzoquinone reductase from Pseudomonas sp. strain WBC-3.

Authors:  Jun-Jie Zhang; Hong Liu; Yi Xiao; Xian-En Zhang; Ning-Yi Zhou
Journal:  J Bacteriol       Date:  2009-02-13       Impact factor: 3.490

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