Literature DB >> 9380687

Protein folding kinetics exhibit an Arrhenius temperature dependence when corrected for the temperature dependence of protein stability.

M L Scalley1, D Baker.   

Abstract

The anomalous temperature dependence of protein folding has received considerable attention. Here we show that the temperature dependence of the folding of protein L becomes extremely simple when the effects of temperature on protein stability are corrected for; the logarithm of the folding rate is a linear function of 1/T on constant stability contours in the temperature-denaturant plane. This convincingly demonstrates that the anomalous temperature dependence of folding derives from the temperature dependence of the interactions that stabilize proteins, rather than from the super Arrhenius temperature dependence predicted for the configurational diffusion constant on a rough energy landscape. However, because of the limited temperature range accessible to experiment, the results do not rule out models with higher order temperature dependences. The significance of the slope of the stability-corrected Arrhenius plots is discussed.

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Year:  1997        PMID: 9380687      PMCID: PMC23430          DOI: 10.1073/pnas.94.20.10636

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  17 in total

1.  Cytochrome c folding triggered by electron transfer.

Authors:  G A Mines; T Pascher; S C Lee; J R Winkler; H B Gray
Journal:  Chem Biol       Date:  1996-06

Review 2.  Fast-folding experiments and the topography of protein folding energy landscapes.

Authors:  P Wolynes; Z Luthey-Schulten; J Onuchic
Journal:  Chem Biol       Date:  1996-06

Review 3.  From Levinthal to pathways to funnels.

Authors:  K A Dill; H S Chan
Journal:  Nat Struct Biol       Date:  1997-01

4.  Titration properties and thermodynamics of the transition state for folding: comparison of two-state and multi-state folding pathways.

Authors:  Y J Tan; M Oliveberg; A R Fersht
Journal:  J Mol Biol       Date:  1996-11-29       Impact factor: 5.469

5.  A comparison of the folding kinetics and thermodynamics of two homologous fibronectin type III modules.

Authors:  K W Plaxco; C Spitzfaden; I D Campbell; C M Dobson
Journal:  J Mol Biol       Date:  1997-08-01       Impact factor: 5.469

6.  Toward an outline of the topography of a realistic protein-folding funnel.

Authors:  J N Onuchic; P G Wolynes; Z Luthey-Schulten; N D Socci
Journal:  Proc Natl Acad Sci U S A       Date:  1995-04-11       Impact factor: 11.205

7.  Evolution-like selection of fast-folding model proteins.

Authors:  A M Gutin; V I Abkevich; E I Shakhnovich
Journal:  Proc Natl Acad Sci U S A       Date:  1995-02-28       Impact factor: 11.205

8.  Local interactions and the optimization of protein folding.

Authors:  R Doyle; K Simons; H Qian; D Baker
Journal:  Proteins       Date:  1997-11

9.  Kinetics of folding of the IgG binding domain of peptostreptococcal protein L.

Authors:  M L Scalley; Q Yi; H Gu; A McCormack; J R Yates; D Baker
Journal:  Biochemistry       Date:  1997-03-18       Impact factor: 3.162

10.  Low-temperature unfolding of a mutant of phage T4 lysozyme. 2. Kinetic investigations.

Authors:  B L Chen; W A Baase; J A Schellman
Journal:  Biochemistry       Date:  1989-01-24       Impact factor: 3.162

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  47 in total

1.  Non-Arrhenius kinetics for the loop closure of a DNA hairpin.

Authors:  M I Wallace; L Ying; S Balasubramanian; D Klenerman
Journal:  Proc Natl Acad Sci U S A       Date:  2001-04-24       Impact factor: 11.205

2.  Nonglassy kinetics in the folding of a simple single-domain protein.

Authors:  B Gillespie; K W Plaxco
Journal:  Proc Natl Acad Sci U S A       Date:  2000-10-24       Impact factor: 11.205

3.  Configurational diffusion down a folding funnel describes the dynamics of DNA hairpins.

Authors:  A Ansari; S V Kuznetsov; Y Shen
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-03       Impact factor: 11.205

4.  Folding rate prediction using total contact distance.

Authors:  Hongyi Zhou; Yaoqi Zhou
Journal:  Biophys J       Date:  2002-01       Impact factor: 4.033

5.  Intermediates can accelerate protein folding.

Authors:  C Wagner; T Kiefhaber
Journal:  Proc Natl Acad Sci U S A       Date:  1999-06-08       Impact factor: 11.205

6.  How fast is protein hydrophobic collapse?

Authors:  Mourad Sadqi; Lisa J Lapidus; Victor Muñoz
Journal:  Proc Natl Acad Sci U S A       Date:  2003-10-06       Impact factor: 11.205

Review 7.  Genomic biodiversity, phylogenetics and coevolution in proteins.

Authors:  David D Pollock
Journal:  Appl Bioinformatics       Date:  2002

8.  Folding simulations of a de novo designed protein with a betaalphabeta fold.

Authors:  Yifei Qi; Yongqi Huang; Huanhuan Liang; Zhirong Liu; Luhua Lai
Journal:  Biophys J       Date:  2010-01-20       Impact factor: 4.033

9.  Small-angle X-ray scattering and single-molecule FRET spectroscopy produce highly divergent views of the low-denaturant unfolded state.

Authors:  Tae Yeon Yoo; Steve P Meisburger; James Hinshaw; Lois Pollack; Gilad Haran; Tobin R Sosnick; Kevin Plaxco
Journal:  J Mol Biol       Date:  2012-01-27       Impact factor: 5.469

10.  Pressure equilibrium and jump study on unfolding of 23-kDa protein from spinach photosystem II.

Authors:  Cui-Yan Tan; Chun-He Xu; Jun Wong; Jian-Ren Shen; Shinsuke Sakuma; Yasusi Yamamoto; Reinhard Lange; Claude Balny; Kang-Cheng Ruan
Journal:  Biophys J       Date:  2004-11-05       Impact factor: 4.033

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