Literature DB >> 9380666

Hydrogen bonding revisited: geometric selection as a principal determinant of DNA replication fidelity.

M F Goodman1.   

Abstract

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Year:  1997        PMID： 9380666      PMCID： PMC33771          DOI： 10.1073/pnas.94.20.10493

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN： 0027-8424            Impact factor:   11.205


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  28 in total

1.  Difluorotoluene, a Nonpolar Isostere for Thymine, Codes Specifically and Efficiently for Adenine in DNA Replication.

Authors:  Sean Moran; Rex X-F Ren; Squire Rumney; Eric T Kool
Journal:  J Am Chem Soc       Date:  1997-02-26       Impact factor: 15.419

2.  The fidelity of base selection by the polymerase subunit of DNA polymerase III holoenzyme.

Authors:  D L Sloane; M F Goodman; H Echols
Journal:  Nucleic Acids Res       Date:  1988-07-25       Impact factor: 16.971

3.  Nearest neighbor influences on DNA polymerase insertion fidelity.

Authors:  L V Mendelman; M S Boosalis; J Petruska; M F Goodman
Journal:  J Biol Chem       Date:  1989-08-25       Impact factor: 5.157

4.  The accuracy of reverse transcriptase from HIV-1.

Authors:  J D Roberts; K Bebenek; T A Kunkel
Journal:  Science       Date:  1988-11-25       Impact factor: 47.728

5.  Studies on the biochemical basis of spontaneous mutation. I. A comparison of the deoxyribonucleic acid polymerases of mutator, antimutator, and wild type strains of bacteriophage T4.

Authors:  N Muzyczka; R L Poland; M J Bessman
Journal:  J Biol Chem       Date:  1972-11-25       Impact factor: 5.157

6.  Enzymatic synthesis of deoxyribonucleic acid. 36. A proofreading function for the 3' leads to 5' exonuclease activity in deoxyribonucleic acid polymerases.

Authors:  D Brutlag; A Kornberg
Journal:  J Biol Chem       Date:  1972-01-10       Impact factor: 5.157

7.  Base selection, proofreading, and mismatch repair during DNA replication in Escherichia coli.

Authors:  R M Schaaper
Journal:  J Biol Chem       Date:  1993-11-15       Impact factor: 5.157

8.  Enthalpy-entropy compensation in DNA melting thermodynamics.

Authors:  J Petruska; M F Goodman
Journal:  J Biol Chem       Date:  1995-01-13       Impact factor: 5.157

9.  Mutation rate: some biological and biochemical considerations.

Authors:  H Echols
Journal:  Biochimie       Date:  1982 Aug-Sep       Impact factor: 4.079

10.  A thymidine triphosphate shape analog lacking Watson-Crick pairing ability is replicated with high sequence selectivity.

Authors:  S Moran; R X Ren; E T Kool
Journal:  Proc Natl Acad Sci U S A       Date:  1997-09-30       Impact factor: 11.205
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  56 in total

1.  Efficient gene targeted random mutagenesis in genetically stable Escherichia coli strains.

Authors:  C Fabret; S Poncet; S Danielsen; T V Borchert; S D Ehrlich; L Jannière
Journal:  Nucleic Acids Res       Date:  2000-11-01       Impact factor: 16.971

2.  Template nucleotide moieties required for de novo initiation of RNA synthesis by a recombinant viral RNA-dependent RNA polymerase.

Authors:  M J Kim; W Zhong; Z Hong; C C Kao
Journal:  J Virol       Date:  2000-11       Impact factor: 5.103

3.  High-fidelity in vivo replication of DNA base shape mimics without Watson-Crick hydrogen bonds.

Authors:  James C Delaney; Paul T Henderson; Sandra A Helquist; Juan C Morales; John M Essigmann; Eric T Kool
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-03       Impact factor: 11.205

4.  Mechanism of nucleotide incorporation opposite a thymine-thymine dimer by yeast DNA polymerase eta.

Authors:  M Todd Washington; Louise Prakash; Satya Prakash
Journal:  Proc Natl Acad Sci U S A       Date:  2003-10-03       Impact factor: 11.205

5.  Human DNA polymerase iota utilizes different nucleotide incorporation mechanisms dependent upon the template base.

Authors:  M Todd Washington; Robert E Johnson; Louise Prakash; Satya Prakash
Journal:  Mol Cell Biol       Date:  2004-01       Impact factor: 4.272

6.  Requirement of Watson-Crick hydrogen bonding for DNA synthesis by yeast DNA polymerase eta.

Authors:  M Todd Washington; Sandra A Helquist; Eric T Kool; Louise Prakash; Satya Prakash
Journal:  Mol Cell Biol       Date:  2003-07       Impact factor: 4.272

7.  Structural basis for recruitment of translesion DNA polymerase Pol IV/DinB to the beta-clamp.

Authors:  Karen A Bunting; S Mark Roe; Laurence H Pearl
Journal:  EMBO J       Date:  2003-11-03       Impact factor: 11.598

8.  Yeast DNA polymerase eta makes functional contacts with the DNA minor groove only at the incoming nucleoside triphosphate.

Authors:  M Todd Washington; William T Wolfle; Thomas E Spratt; Louise Prakash; Satya Prakash
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-11       Impact factor: 11.205

9.  Structural basis for the dual coding potential of 8-oxoguanosine by a high-fidelity DNA polymerase.

Authors:  Luis G Brieba; Brandt F Eichman; Robert J Kokoska; Sylvie Doublié; Tom A Kunkel; Tom Ellenberger
Journal:  EMBO J       Date:  2004-08-05       Impact factor: 11.598

10.  Structural insights into DNA replication without hydrogen bonds.

Authors:  Karin Betz; Denis A Malyshev; Thomas Lavergne; Wolfram Welte; Kay Diederichs; Floyd E Romesberg; Andreas Marx
Journal:  J Am Chem Soc       Date:  2013-11-27       Impact factor: 15.419
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