Literature DB >> 9374856

Intramolecular assistance of cis/trans isomerization of the histidine-proline moiety.

U Reimer1, N el Mokdad, M Schutkowski, G Fischer.   

Abstract

Peptidyl-prolyl cis/trans isomerization is a slow conformational interconversion in the polypeptide backbone that is frequently rate-limiting in refolding of proteins and is thought to play a role in cellular restructuring of proteins. In order to probe the influence of positively charged amino acids located in sequence segments adjacent to proline, the rotational barriers of Arg-Pro- and His-Pro-containing peptides were determined by isomer-specific proteolysis and dynamic NMR spectroscopy for Suc-Ala-His-Pro-Phe-NH-Np, Ac-Ala-Arg-Pro-Ala-Lys-NH2, Ac-Ala-His-Pro-Ala-Lys-NH2, angiotensin III, thyrotropin-releasing hormone (TRH), and [His(3-Me)2]TRH in aqueous solution. In contrast to the guanidinium group of arginine, the protonated side chain of histidine preceding proline led to an acceleration of the prolyl isomerization up to 10-fold relative to the unprotonated state. Both arginine and histidine residues succeeding proline in an amino acid sequence proved to be ineffective. Under basic and acidic conditions the kinetic solvent deuterium isotope effects Kc-->tH20/Kc-->tD20 for angiotensin III were 1.0 +/- 0.1 and 2.0 +/- 0.1, respectively. The results are interpreted in terms of intramolecular general acid catalysis of prolyl bond rotation by the imidazolium group that is without precedent in intermolecular catalysis.

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Year:  1997        PMID: 9374856     DOI: 10.1021/bi9713916

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  9 in total

1.  Folding of barstar C40A/C82A/P27A and catalysis of the peptidyl-prolyl cis/trans isomerization by human cytosolic cyclophilin (Cyp18).

Authors:  R Golbik; G Fischer; A R Fersht
Journal:  Protein Sci       Date:  1999-07       Impact factor: 6.725

2.  A selection for mutants that interfere with folding of Escherichia coli thioredoxin-1 in vivo.

Authors:  Damon Huber; Myoung-Il Cha; Laurent Debarbieux; Anne-Gaëlle Planson; Nelly Cruz; Gary López; María Luisa Tasayco; Alain Chaffotte; Jon Beckwith
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-15       Impact factor: 11.205

3.  Structural influences on preferential oxazolone versus diketopiperazine b(2+) ion formation for histidine analogue-containing peptides.

Authors:  Ashley C Gucinski; Julia Chamot-Rooke; Edith Nicol; Árpád Somogyi; Vicki H Wysocki
Journal:  J Phys Chem A       Date:  2012-04-24       Impact factor: 2.781

4.  The role of proline and glycine in determining the backbone flexibility of a channel-forming peptide.

Authors:  J Jacob; H Duclohier; D S Cafiso
Journal:  Biophys J       Date:  1999-03       Impact factor: 4.033

5.  Reaction of the zinc sensor FluoZin-3 with Zn(7)-metallothionein: Inquiry into the existence of a proposed weak binding site.

Authors:  Mohammad Ali Namdarghanbari; Jeffrey Meeusen; Gary Bachowski; Nicholas Giebel; Jeremiah Johnson; David H Petering
Journal:  J Inorg Biochem       Date:  2009-11-18       Impact factor: 4.155

6.  Characterization of a folding intermediate from HIV-1 ribonuclease H.

Authors:  G Kern; T Handel; S Marqusee
Journal:  Protein Sci       Date:  1998-10       Impact factor: 6.725

7.  Mechanism of Fine-tuning pH Sensors in Proprotein Convertases: IDENTIFICATION OF A pH-SENSING HISTIDINE PAIR IN THE PROPEPTIDE OF PROPROTEIN CONVERTASE 1/3.

Authors:  Danielle M Williamson; Johannes Elferich; Ujwal Shinde
Journal:  J Biol Chem       Date:  2015-07-30       Impact factor: 5.157

8.  Measuring the Energy Barrier of the Structural Change That Initiates Amyloid Formation.

Authors:  Blaise G Arden; Nicholas B Borotto; Brittney Burant; William Warren; Christine Akiki; Richard W Vachet
Journal:  Anal Chem       Date:  2020-03-17       Impact factor: 6.986

9.  Structural and dynamic implications of an effector-induced backbone amide cis-trans isomerization in cytochrome P450cam.

Authors:  Eliana K Asciutto; Jeffry D Madura; Susan Sondej Pochapsky; Bo OuYang; Thomas C Pochapsky
Journal:  J Mol Biol       Date:  2009-03-24       Impact factor: 5.469

  9 in total

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