Literature DB >> 9359421

Transient times in linear metabolic pathways under constant affinity constraints.

M Lloréns1, J C Nuño, F Montero.   

Abstract

In the early seventies, Easterby began the analytical study of transition times for linear reaction schemes [Easterby (1973) Biochim. Biophys. Acta 293, 552-558]. In this pioneer work and in subsequent papers, a state function (the transient time) was used to measure the period before the stationary state, for systems constrained to work under both constant and variable input flux, was reached. Despite the undoubted usefulness of this quantity to describe the time-dependent features of these kinds of systems, its application to the study of chemical reactions under other constraints is questionable. In the present work, a generalization of these magnitudes to linear metabolic pathways functioning under a constant-affinity constraint is carried out. It is proved that classical definitions of transient times do not reflect the actual properties of the transition to the steady state in systems evolving under this restriction. Alternatively, a more adequate framework for interpretation of the transient times for systems with both constant and variable input flux is suggested. Within this context, new definitions that reflect more accurately the transient characteristics of constant affinity systems are stated. Finally, the meaning of these transient times is discussed.

Mesh:

Year:  1997        PMID: 9359421      PMCID: PMC1218821          DOI: 10.1042/bj3270493

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  11 in total

1.  Analysis and characterization of transition states in metabolic systems. Transition times and the passivity of the output flux.

Authors:  N V Torres; J Sicilia; E Meléndez-Hevia
Journal:  Biochem J       Date:  1991-05-15       Impact factor: 3.857

Review 2.  Mathematical analysis of enzymic reaction systems using optimization principles.

Authors:  R Heinrich; S Schuster; H G Holzhütter
Journal:  Eur J Biochem       Date:  1991-10-01

3.  The metabolic productivity of the cell factory.

Authors:  M Cascante; M Lloréns; E Meléndez-Hevia; J Puigjaner; F Montero; E Martí
Journal:  J Theor Biol       Date:  1996-10-07       Impact factor: 2.691

4.  Theoretical approaches to the evolutionary optimization of glycolysis: thermodynamic and kinetic constraints.

Authors:  R Heinrich; F Montero; E Klipp; T G Waddell; E Meléndez-Hevia
Journal:  Eur J Biochem       Date:  1997-01-15

5.  Theoretical approaches to the evolutionary optimization of glycolysis--chemical analysis.

Authors:  E Meléndez-Hevia; T G Waddell; R Heinrich; F Montero
Journal:  Eur J Biochem       Date:  1997-03-01

6.  The effect of feedback on pathway transient response.

Authors:  J S Easterby
Journal:  Biochem J       Date:  1986-02-01       Impact factor: 3.857

7.  The kinetics of coupled enzyme reactions. Applications to the assay of glucokinase, with glucose 6-phosphate dehydrogenase as coupling enzyme.

Authors:  A C Storer; A Cornish-Bowden
Journal:  Biochem J       Date:  1974-07       Impact factor: 3.857

8.  Coupled enzyme assays: a general expression for the transient.

Authors:  J S Easterby
Journal:  Biochim Biophys Acta       Date:  1973-02-15

9.  The kinetics of consecutive enzyme reactions. The design of coupled assays and the temporal response of pathways.

Authors:  J S Easterby
Journal:  Biochem J       Date:  1984-05-01       Impact factor: 3.857

10.  A generalized theory of the transition time for sequential enzyme reactions.

Authors:  J S Easterby
Journal:  Biochem J       Date:  1981-10-01       Impact factor: 3.857

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  1 in total

1.  Generalization of the theory of transition times in metabolic pathways: a geometrical approach.

Authors:  M Lloréns; J C Nuño; Y Rodríguez; E Meléndez-Hevia; F Montero
Journal:  Biophys J       Date:  1999-07       Impact factor: 4.033

  1 in total

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