Literature DB >> 9356243

Promoter-specific activation of gene expression directed by bacteriophage-selected zinc fingers.

Y Choo1, A Castellanos, B García-Hernández, I Sánchez-García, A Klug.   

Abstract

It has been shown that sequence-specific DNA-binding domains containing zinc fingers can be selected from libraries displayed on filamentous bacteriophage. The affinity and specificity of these peptides are well characterised in vitro, but few data are available to demonstrate specific DNA binding and discrimination between closely related DNA sequences in vivo. Transient transactivation assays were performed in mammalian cells, using expression plasmids which produce different amounts of a model transcription factor containing a phage-selected zinc finger DNA-binding domain, and reporter plasmids which carry systematic variations of the promoter sequence. When the intracellular concentration of the transcription factor was appropriate, activation of gene expression was absolutely dependent on a promoter having the same DNA sequence as that originally used to select the zinc finger domain by phage display. However, excessive intracellular concentrations of the transcription factor resulted in some less-specific DNA binding, leading to gene activation from similar promoters containing a maximum of two base changes. Thus, provided delivery is carefully controlled, highly specific control of gene expression in vivo can be achieved using artificial transcription factors containing phage-selected zinc finger DNA-binding domains. Copyright 1997 Academic Press Limited.

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Year:  1997        PMID: 9356243     DOI: 10.1006/jmbi.1997.1339

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  11 in total

1.  A novel four zinc-finger protein targeted against p190(BcrAbl) fusion oncogene cDNA: utilisation of zinc-finger recognition codes.

Authors:  A R McNamara; K G Ford
Journal:  Nucleic Acids Res       Date:  2000-12-15       Impact factor: 16.971

Review 2.  Chemical approaches to control gene expression.

Authors:  J M Gottesfeld; J M Turner; P B Dervan
Journal:  Gene Expr       Date:  2000

3.  Systematic characterization of the zinc-finger-containing proteins in the mouse transcriptome.

Authors:  Timothy Ravasi; Thomas Huber; Mihaela Zavolan; Alistair Forrest; Terry Gaasterland; Sean Grimmond; David A Hume
Journal:  Genome Res       Date:  2003-06       Impact factor: 9.043

4.  Characterisation of site-biased DNA methyltransferases: specificity, affinity and subsite relationships.

Authors:  Andrew R McNamara; Paul J Hurd; Alexander E F Smith; Kevin G Ford
Journal:  Nucleic Acids Res       Date:  2002-09-01       Impact factor: 16.971

5.  Solution structure and dynamics of a de novo designed three-helix bundle protein.

Authors:  S T Walsh; H Cheng; J W Bryson; H Roder; W F DeGrado
Journal:  Proc Natl Acad Sci U S A       Date:  1999-05-11       Impact factor: 11.205

6.  Human immunodeficiency virus type 1 incorporated with fusion proteins consisting of integrase and the designed polydactyl zinc finger protein E2C can bias integration of viral DNA into a predetermined chromosomal region in human cells.

Authors:  Wenjie Tan; Zheng Dong; Thomas A Wilkinson; Carlos F Barbas; Samson A Chow
Journal:  J Virol       Date:  2006-02       Impact factor: 5.103

7.  An efficient and cost-effective protocol for selecting transcription factor binding sites that reduces isotope usage.

Authors:  Joseph Krystel; Kasirajan Ayyanathan
Journal:  J Biomol Tech       Date:  2012-07

8.  Regulation of the PMP22 gene through an intronic enhancer.

Authors:  Erin A Jones; Camila Lopez-Anido; Rajini Srinivasan; Courtney Krueger; Li-Wei Chang; Rakesh Nagarajan; John Svaren
Journal:  J Neurosci       Date:  2011-03-16       Impact factor: 6.167

9.  Cloning and characterization of mCtBP2, a co-repressor that associates with basic Krüppel-like factor and other mammalian transcriptional regulators.

Authors:  J Turner; M Crossley
Journal:  EMBO J       Date:  1998-09-01       Impact factor: 11.598

10.  Fusion proteins consisting of human immunodeficiency virus type 1 integrase and the designed polydactyl zinc finger protein E2C direct integration of viral DNA into specific sites.

Authors:  Wenjie Tan; Kai Zhu; David J Segal; Carlos F Barbas; Samson A Chow
Journal:  J Virol       Date:  2004-02       Impact factor: 5.103

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