Literature DB >> 9341154

Thermus thermophilis dnaX homolog encoding gamma- and tau-like proteins of the chromosomal replicase.

O Yurieva1, M Skangalis, J Kuriyan, M O'Donnell.   

Abstract

This report identifies the dnaX homolog from Thermus thermophilis. Replicases from bacteria to humans contain subunits that are homologous to one another. These homologs are subunits of a clamp loading apparatus that loads sliding clamps onto DNA, which in turn act as mobile tethers for the replication machinery. In Escherichia coli, two of these subunits (gamma and tau) are encoded by one gene (dnaX) in nearly equal amounts by way of an efficient translational frameshift. The gamma and tau subunits form the central touchpoint that holds together two DNA polymerases with one clamp loading apparatus to form the E. coli chromosomal replicase, DNA polymerase III holoenzyme. The E. coli holoenzyme is an efficient replication machine that simultaneously replicates both strands of duplex DNA. The T. thermophilis dnaX homolog also contains a frameshift signature and produces both tau- and gamma-like proteins. Recombinant T. thermophilis tau- and gamma-like proteins, expressed in E. coli, have an oligomeric state similar to that of their E. coli counterparts and display ATPase activity that is stimulated by DNA. These results imply that T. thermophilis utilizes a DNA polymerase III holoenzyme replication machinery similar to that of E. coli.

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Year:  1997        PMID: 9341154     DOI: 10.1074/jbc.272.43.27131

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  11 in total

1.  Genetic diversity: frameshift mechanisms alter coding of a gene (Epstein-Barr virus LF3 gene) that contains multiple 102-base-pair direct sequence repeats.

Authors:  Shao-An Xue; M D Jones; Qi-Long Lu; J M Middeldorp; Beverly E Griffin
Journal:  Mol Cell Biol       Date:  2003-03       Impact factor: 4.272

2.  Does disparate occurrence of autoregulatory programmed frameshifting in decoding the release factor 2 gene reflect an ancient origin with loss in independent lineages?

Authors:  B C Persson; J F Atkins
Journal:  J Bacteriol       Date:  1998-07       Impact factor: 3.490

3.  Nonlinearity in genetic decoding: homologous DNA replicase genes use alternatives of transcriptional slippage or translational frameshifting.

Authors:  B Larsen; N M Wills; C Nelson; J F Atkins; R F Gesteland
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-15       Impact factor: 11.205

4.  Allosteric regulation of the primase (DnaG) activity by the clamp-loader (tau) in vitro.

Authors:  Kiran Chintakayala; Cristina Machón; Anna Haroniti; Marilyn A Larson; Steven H Hinrichs; Mark A Griep; Panos Soultanas
Journal:  Mol Microbiol       Date:  2009-04       Impact factor: 3.501

Review 5.  Architecture and conservation of the bacterial DNA replication machinery, an underexploited drug target.

Authors:  Andrew Robinson; Rebecca J Causer; Nicholas E Dixon
Journal:  Curr Drug Targets       Date:  2012-03       Impact factor: 3.465

6.  Transcriptional slippage in bacteria: distribution in sequenced genomes and utilization in IS element gene expression.

Authors:  Pavel V Baranov; Andrew W Hammer; Jiadong Zhou; Raymond F Gesteland; John F Atkins
Journal:  Genome Biol       Date:  2005-02-15       Impact factor: 13.583

7.  Long-Range PCR Amplification of DNA by DNA Polymerase III Holoenzyme from Thermus thermophilus.

Authors:  Wendy Ribble; Shawn D Kane; James M Bullard
Journal:  Enzyme Res       Date:  2015-01-19

Review 8.  A Replisome's journey through the bacterial chromosome.

Authors:  Thomas R Beattie; Rodrigo Reyes-Lamothe
Journal:  Front Microbiol       Date:  2015-06-05       Impact factor: 5.640

9.  The clamp-loader-helicase interaction in Bacillus. Atomic force microscopy reveals the structural organisation of the DnaB-tau complex in Bacillus.

Authors:  Anna Haroniti; Christopher Anderson; Zara Doddridge; Laurence Gardiner; Clive J Roberts; Stephanie Allen; Panos Soultanas
Journal:  J Mol Biol       Date:  2004-02-13       Impact factor: 5.469

10.  Functional interplay of DnaE polymerase, DnaG primase and DnaC helicase within a ternary complex, and primase to polymerase hand-off during lagging strand DNA replication in Bacillus subtilis.

Authors:  Olivier Rannou; Emmanuelle Le Chatelier; Marilynn A Larson; Hamid Nouri; Bérengère Dalmais; Charles Laughton; Laurent Jannière; Panos Soultanas
Journal:  Nucleic Acids Res       Date:  2013-04-05       Impact factor: 16.971

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