Literature DB >> 9291962

Rice molecular genetic map using RFLPs and its applications.

Y Nagamura1, B A Antonio, T Sasaki.   

Abstract

In the past decade, notable progress has been made in rice molecular genetic mapping using genomic or cDNA clones. A total of over 3000 DNA markers, mainly with RFLPs, have been mapped on the rice genome. In addition, many studies related to tagging of genes of interest, gene isolation by map-based cloning and comparative mapping between cereal genomes have advanced along with the development of a high-density molecular genetic map. Thus rice is considered a pivotal plant among cereal crops and, in addition to Arabidopsis, is a model plant in genome analysis. In this article, the current status of the construction of rice molecular genetic maps and their applications are reviewed.

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Year:  1997        PMID: 9291962

Source DB:  PubMed          Journal:  Plant Mol Biol        ISSN: 0167-4412            Impact factor:   4.076


  67 in total

1.  High density molecular linkage maps of the tomato and potato genomes.

Authors:  S D Tanksley; M W Ganal; J P Prince; M C de Vicente; M W Bonierbale; P Broun; T M Fulton; J J Giovannoni; S Grandillo; G B Martin
Journal:  Genetics       Date:  1992-12       Impact factor: 4.562

2.  Construction of genetic linkage maps in maize and tomato using restriction fragment length polymorphisms.

Authors:  T Helentjaris; M Slocum; S Wright; A Schaefer; J Nienhuis
Journal:  Theor Appl Genet       Date:  1986-09       Impact factor: 5.699

3.  Comparative genetic mapping between duplicated segments on maize chromosomes 3 and 8 and homoeologous regions in sorghum and sugarcane.

Authors:  P Dufour; L Grivet; A D'Hont; M Deu; G Trouche; J C Glaszmann; P Hamon
Journal:  Theor Appl Genet       Date:  1996-06       Impact factor: 5.699

4.  AFLP: a new technique for DNA fingerprinting.

Authors:  P Vos; R Hogers; M Bleeker; M Reijans; T van de Lee; M Hornes; A Frijters; J Pot; J Peleman; M Kuiper
Journal:  Nucleic Acids Res       Date:  1995-11-11       Impact factor: 16.971

5.  Determination of RAPD markers in rice and their conversion into sequence tagged sites (STSs) and STS-specific primers.

Authors:  L Monna; A Miyao; T Inoue; S Fukuoka; M Yamazaki; H S Zhong; T Sasaki; Y Minobe
Journal:  DNA Res       Date:  1994       Impact factor: 4.458

6.  The A. thaliana disease resistance gene RPS2 encodes a protein containing a nucleotide-binding site and leucine-rich repeats.

Authors:  M Mindrinos; F Katagiri; G L Yu; F M Ausubel
Journal:  Cell       Date:  1994-09-23       Impact factor: 41.582

7.  RFLP mapping of genes conferring complete and partial resistance to blast in a durably resistant rice cultivar.

Authors:  G L Wang; D J Mackill; J M Bonman; S R McCouch; M C Champoux; R J Nelson
Journal:  Genetics       Date:  1994-04       Impact factor: 4.562

8.  RFLP and RAPD mapping of the rice gm2 gene that confers resistance to biotype 1 of gall midge (Orseolia oryzae).

Authors:  M Mohan; S Nair; J S Bentur; U P Rao; J Bennett
Journal:  Theor Appl Genet       Date:  1994-02       Impact factor: 5.699

Review 9.  Construction of a genetic linkage map in man using restriction fragment length polymorphisms.

Authors:  D Botstein; R L White; M Skolnick; R W Davis
Journal:  Am J Hum Genet       Date:  1980-05       Impact factor: 11.025

10.  Comparative genome mapping of Sorghum and maize.

Authors:  R Whitkus; J Doebley; M Lee
Journal:  Genetics       Date:  1992-12       Impact factor: 4.562

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  9 in total

1.  A maize map standard with sequenced core markers, grass genome reference points and 932 expressed sequence tagged sites (ESTs) in a 1736-locus map.

Authors:  G L Davis; M D McMullen; C Baysdorfer; T Musket; D Grant; M Staebell; G Xu; M Polacco; L Koster; S Melia-Hancock; K Houchins; S Chao; E H Coe
Journal:  Genetics       Date:  1999-07       Impact factor: 4.562

Review 2.  The bioinformatics challenges in comparative analysis of cereal genomes-an overview.

Authors:  M Bellgard; Jia Ye; T Gojobori; R Appels
Journal:  Funct Integr Genomics       Date:  2004-02-10       Impact factor: 3.410

3.  Quantitative trait loci for component physiological traits determining salt tolerance in rice.

Authors:  M L Koyama; A Levesley; R M Koebner; T J Flowers; A R Yeo
Journal:  Plant Physiol       Date:  2001-01       Impact factor: 8.340

4.  A high-density rice genetic linkage map with 2275 markers using a single F2 population.

Authors:  Y Harushima; M Yano; A Shomura; M Sato; T Shimano; Y Kuboki; T Yamamoto; S Y Lin; B A Antonio; A Parco; H Kajiya; N Huang; K Yamamoto; Y Nagamura; N Kurata; G S Khush; T Sasaki
Journal:  Genetics       Date:  1998-01       Impact factor: 4.562

5.  Inferences on the genome structure of progenitor maize through comparative analysis of rice, maize and the domesticated panicoids.

Authors:  W A Wilson; S E Harrington; W L Woodman; M Lee; M E Sorrells; S R McCouch
Journal:  Genetics       Date:  1999-09       Impact factor: 4.562

Review 6.  Structural and functional analysis of rice genome.

Authors:  Akhilesh K Tyagi; Jitendra P Khurana; Paramjit Khurana; Saurabh Raghuvanshi; Anumapa Gaur; Anita Kapur; Vikrant Gupta; Dibyendu Kumar; V Ravi; Shubha Vij; Parul Khurana; Sulabha Sharma
Journal:  J Genet       Date:  2004-04       Impact factor: 1.166

7.  Comparative mapping reveals partial conservation of synteny at the apomixis locus in Paspalum spp.

Authors:  F Pupilli; E J Martinez; A Busti; O Calderini; C L Quarin; S Arcioni
Journal:  Mol Genet Genomics       Date:  2003-11-26       Impact factor: 3.291

8.  Ac/Ds-induced chromosomal rearrangements in rice genomes.

Authors:  Yuan Hu Xuan; Jianbo Zhang; Thomas Peterson; Chang-Deok Han
Journal:  Mob Genet Elements       Date:  2012-03-01

9.  Transposon Ac/Ds-induced chromosomal rearrangements at the rice OsRLG5 locus.

Authors:  Yuan Hu Xuan; Hai Long Piao; Byoung Il Je; Soon Ju Park; Su Hyun Park; Jin Huang; Jian Bo Zhang; Thomas Peterson; Chang-deok Han
Journal:  Nucleic Acids Res       Date:  2011-09-28       Impact factor: 16.971

  9 in total

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