Literature DB >> 9291138

Chicken vigilin gene: a distinctive pattern of hypersensitive sites is characteristic for its transcriptional activity.

A Grünweller1, W G Purschke, S Kügler, C Kruse, P K Müller.   

Abstract

Vigilin, a multidomain hn-ribonucleo-K-homologous protein, is part of a ribonucleoprotein complex with cognate tRNA and is found in both the nucleus and the cytoplasm. In an approach to identify genomic regions involved in regulation of the chicken vigilin gene, we carried out transfection studies with a reporter gene in suitable chicken cells. After including a distantly positioned 5'-sequence in the construct, we observed a 10.5-fold increase in luciferase (EC 1. 13.12.7) expression compared with basal promoter activity. Accordingly, chromatin analysis of freshly isolated embryonic tendon fibroblasts with high levels of vigilin mRNA expression shows a DNase-I-hypersensitive site (DHS1) localized 2.2 kb upstream of the transcriptional start site. Similarly, phytohaemagglutinin-stimulated lymphocytes with a 4-fold elevated expression of vigilin mRNA compared with resting lymphocytes also exhibited this unique DHS, having switched from that found at 3.3 kb (DHS2) in resting lymphocytes. Furthermore, using gel-retardation experiments with DNA representing either DHS1 or DHS2, a specific interaction with chicken nuclear extracts was seen.

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Year:  1997        PMID: 9291138      PMCID: PMC1218711          DOI: 10.1042/bj3260601

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  43 in total

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Authors:  Y F Hu; B Lüscher; A Admon; N Mermod; R Tjian
Journal:  Genes Dev       Date:  1990-10       Impact factor: 11.361

2.  One-hour downward alkaline capillary transfer for blotting of DNA and RNA.

Authors:  P Chomczynski
Journal:  Anal Biochem       Date:  1992-02-14       Impact factor: 3.365

3.  Characterization of a strong positive cis-acting element of the human beta-myosin heavy chain gene in fetal rat heart cells.

Authors:  I L Flink; J G Edwards; J J Bahl; C C Liew; M Sole; E Morkin
Journal:  J Biol Chem       Date:  1992-05-15       Impact factor: 5.157

4.  Activation of class II gene transcription by regulatory factors is potentiated by a novel activity.

Authors:  M Meisterernst; A L Roy; H M Lieu; R G Roeder
Journal:  Cell       Date:  1991-09-06       Impact factor: 41.582

5.  The 5' ends of Drosophila heat shock genes in chromatin are hypersensitive to DNase I.

Authors:  C Wu
Journal:  Nature       Date:  1980-08-28       Impact factor: 49.962

6.  DNA hypomethylation and germ cell-specific expression of testis-specific H2B histone gene.

Authors:  Y C Choi; C B Chae
Journal:  J Biol Chem       Date:  1991-10-25       Impact factor: 5.157

7.  Complete cDNA sequence of chicken vigilin, a novel protein with amplified and evolutionary conserved domains.

Authors:  C Schmidt; B Henkel; E Pöschl; H Zorbas; W G Purschke; T R Gloe; P K Müller
Journal:  Eur J Biochem       Date:  1992-06-15

8.  Isolation of coactivators associated with the TATA-binding protein that mediate transcriptional activation.

Authors:  B D Dynlacht; T Hoey; R Tjian
Journal:  Cell       Date:  1991-08-09       Impact factor: 41.582

9.  Localization and functional analysis of DNase-I-hypersensitive sites in the human c-sis/PDGF-B gene transcription unit and its flanking regions.

Authors:  R P Dirks; H J Jansen; J Gerritsma; C Onnekink; H P Bloemers
Journal:  Eur J Biochem       Date:  1993-02-01

10.  Chicken vigilin gene organization and expression pattern. The domain structure of the protein is reflected by the exon structure.

Authors:  B Henkel; C Schmidt; H Zorbas; E Pöschl; T R Gloe; W G Purschke; P K Müller
Journal:  Eur J Biochem       Date:  1992-10-01
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  2 in total

1.  Both KH and non-KH domain sequences are required for polyribosome association of Scp160p in yeast.

Authors:  Ai-min Li; Claudia A Vargas; Melissa A Brykailo; Kimberly K Openo; Anita H Corbett; Judith L Fridovich-Keil
Journal:  Nucleic Acids Res       Date:  2004-09-08       Impact factor: 16.971

2.  Unveiling the gene regulatory landscape in diseases through the identification of DNase I-hypersensitive sites.

Authors:  Ying Chen; Ailing Chen
Journal:  Biomed Rep       Date:  2019-07-31
  2 in total

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