Literature DB >> 9284299

Gramicidin channels in phospholipid bilayers with unsaturated acyl chains.

J Girshman1, D V Greathouse, R E Koeppe, O S Andersen.   

Abstract

In organic solvents gramicidin A (gA) occurs as a mixture of slowly interconverting double-stranded dimers. Membrane-spanning gA channels, in contrast, are almost exclusively single-stranded beta(6,3)-helical dimers. Based on spectroscopic evidence, it has previously been concluded that the conformational preference of gA in phospholipid bilayers varies as a function of the degree of unsaturation of the acyl chains. Double-stranded pi pi(5,6)-helical dimers predominate (over single-stranded beta(6,3)-helical dimers) in lipid bilayer membranes with polyunsaturated acyl chains. We therefore examined the characteristics of channels formed by gA in 1-palmitoyl-2-oleoylphosphatidylcholine/n-decane, 1,2-dioleoylphosphatidylcholine/n-decane, and 1,2-dilinoleoylphosphatidylcholine/n-decane bilayers. We did not observe long-lived channels that could be conducting double-stranded pi pi(5,6)-helical dimers in any of these different membrane environments. We conclude that the single-stranded beta(6,3)-helical dimer is the only conducting species in these bilayers. Somewhat surprisingly, the average channel duration and channel-forming potency of gA are increased in dilinoleoylphosphatidylcholine/n-decane bilayers compared to 1-palmitoyl-2-oleoylphosphatidylcholine/n-decane and dioleoylphosphatidylcholine/n-decane bilayers. To test for specific interactions between the aromatic side chains of gA and the acyl chains of the bilayer, we examined the properties of channels formed by gramicidin analogues in which the four tryptophan residues were replaced with naphthylalanine (gN), tyrosine (gT), and phenylalanine (gM). The results show that all of these analogue channels experience the same relative stabilization when going from dioleoylphosphatidylcholine to dilinoleoylphosphatidylcholine bilayers.

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Year:  1997        PMID: 9284299      PMCID: PMC1181031          DOI: 10.1016/S0006-3495(97)78164-5

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  51 in total

1.  Deformation free energy of bilayer membrane and its effect on gramicidin channel lifetime.

Authors:  H W Huang
Journal:  Biophys J       Date:  1986-12       Impact factor: 4.033

2.  On the conductance heterogeneity in membrane channels formed by gramicidin A. A cooperative study.

Authors:  D D Busath; O S Andersen; R E Koeppe
Journal:  Biophys J       Date:  1987-01       Impact factor: 4.033

3.  The conformation of gramicidin A in dimethylsulphoxide solution. A full analysis of the one- and two-dimensional 1H, 13C, and 15N nuclear-magnetic-resonance spectra.

Authors:  G E Hawkes; L Y Lian; E W Randall; K D Sales; E H Curzon
Journal:  Eur J Biochem       Date:  1987-07-15

4.  Single-channel studies on linear gramicidins with altered amino acid side chains. Effects of altering the polarity of the side chain at position 1 in gramicidin A.

Authors:  E W Russell; L B Weiss; F I Navetta; R E Koeppe; O S Andersen
Journal:  Biophys J       Date:  1986-03       Impact factor: 4.033

5.  On the role of lipid-bilayer elasticity for the lipid-protein interaction and the indirect protein-protein coupling.

Authors:  E Sackmann; R Kotulla; F J Heiszler
Journal:  Can J Biochem Cell Biol       Date:  1984-08

6.  The effects of bilayer thickness and tension on gramicidin single-channel lifetime.

Authors:  J R Elliott; D Needham; J P Dilger; D A Haydon
Journal:  Biochim Biophys Acta       Date:  1983-10-26

7.  Ion movement through gramicidin A channels. Single-channel measurements at very high potentials.

Authors:  O S Andersen
Journal:  Biophys J       Date:  1983-02       Impact factor: 4.033

8.  Single channels of 9, 11, 13, 15-destryptophyl-phenylalanyl-gramicidin A.

Authors:  F Heitz; G Spach; Y Trudelle
Journal:  Biophys J       Date:  1982-10       Impact factor: 4.033

9.  The tryptophans of gramicidin are essential for the lipid structure modulating effect of the peptide.

Authors:  J A Killian; J W Timmermans; S Keur; B de Kruijff
Journal:  Biochim Biophys Acta       Date:  1985-10-24

10.  Phase separation and hexagonal HII phase formation by gramicidins A, B and C in dioleoylphosphatidylcholine model membranes. A study on the role of the tryptophan residues.

Authors:  J A Killian; K N Burger; B de Kruijff
Journal:  Biochim Biophys Acta       Date:  1987-02-26
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  17 in total

1.  The effects of gramicidin on electroporation of lipid bilayers.

Authors:  G C Troiano; K J Stebe; R M Raphael; L Tung
Journal:  Biophys J       Date:  1999-06       Impact factor: 4.033

2.  Interactions of drugs and amphiphiles with membranes: modulation of lipid bilayer elastic properties by changes in acyl chain unsaturation and protonation.

Authors:  Michael J Bruno; Radda Rusinova; Nicholas J Gleason; Roger E Koeppe; Olaf S Andersen
Journal:  Faraday Discuss       Date:  2013       Impact factor: 4.008

3.  Simulation study of a gramicidin/lipid bilayer system in excess water and lipid. I. Structure of the molecular complex.

Authors:  S W Chiu; S Subramaniam; E Jakobsson
Journal:  Biophys J       Date:  1999-04       Impact factor: 4.033

4.  Characterizing Residue-Bilayer Interactions Using Gramicidin A as a Scaffold and Tryptophan Substitutions as Probes.

Authors:  Andrew H Beaven; Alexander J Sodt; Richard W Pastor; Roger E Koeppe; Olaf S Andersen; Wonpil Im
Journal:  J Chem Theory Comput       Date:  2017-09-22       Impact factor: 6.006

5.  Exchange of Gramicidin between Lipid Bilayers: Implications for the Mechanism of Channel Formation.

Authors:  Kevin Lum; Helgi I Ingólfsson; Roger E Koeppe; Olaf S Andersen
Journal:  Biophys J       Date:  2017-10-17       Impact factor: 4.033

Review 6.  Specificity of intramembrane protein-lipid interactions.

Authors:  Francesc-Xabier Contreras; Andreas Max Ernst; Felix Wieland; Britta Brügger
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-06-01       Impact factor: 10.005

Review 7.  The antiarrhythmic effect of n-3 polyunsaturated fatty acids: modulation of cardiac ion channels as a potential mechanism.

Authors:  Y-F Xiao; D C Sigg; A Leaf
Journal:  J Membr Biol       Date:  2005-07       Impact factor: 1.843

Review 8.  Lipid bilayer regulation of membrane protein function: gramicidin channels as molecular force probes.

Authors:  Jens A Lundbaek; Shemille A Collingwood; Helgi I Ingólfsson; Ruchi Kapoor; Olaf S Andersen
Journal:  J R Soc Interface       Date:  2009-11-25       Impact factor: 4.118

9.  Effect of phosphatidylserine on unitary conductance and Ba2+ block of the BK Ca2+-activated K+ channel: re-examination of the surface charge hypothesis.

Authors:  Jin Bong Park; Hee Jeong Kim; Pan Dong Ryu; Edward Moczydlowski
Journal:  J Gen Physiol       Date:  2003-04-14       Impact factor: 4.086

10.  Membrane surface-charge titration probed by gramicidin A channel conductance.

Authors:  T K Rostovtseva; V M Aguilella; I Vodyanoy; S M Bezrukov; V A Parsegian
Journal:  Biophys J       Date:  1998-10       Impact factor: 4.033

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