Literature DB >> 9274818

The detection of enteroviruses in large volume concentrates of recreational waters by the polymerase chain reaction.

R Pallin1, A P Wyn-Jones, B M Place, N F Lightfoot.   

Abstract

A rapid and simple method was developed to detect enteroviruses in large-volume water samples. It relies on the adsorption of the virus capsids to silica particles under acidic conditions, allowing their recovery by relatively gentle centrifugation. Different reagents used in enterovirus concentration and detection were seeded with Coxsackievirus B5 and used to optimise the recovery method, which was then used to detect the enteroviruses from seeded and unseeded 101 seawater samples in one PCR tube rather than in up to 50 sub-sample volumes, demonstrating its use for routine environmental monitoring. Concentrates from 36 recreational water samples from three sites in N.E. England were analysed for enteroviruses by regular and the new method semi-nested PCR, and infectivity in cell culture. Some of the samples were also analysed for faecal indicator bacteria and F-specific bacteriophage. The results showed a marked increase in detection sensitivity when the whole sample concentrate was assayed as compared with a small volume aliquot.

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Year:  1997        PMID: 9274818     DOI: 10.1016/s0166-0934(97)00076-1

Source DB:  PubMed          Journal:  J Virol Methods        ISSN: 0166-0934            Impact factor:   2.014


  11 in total

1.  Membrane adsorption with direct cell culture combined with reverse transcription-PCR as a fast method for identifying enteroviruses from sewage.

Authors:  D Papaventsis; N Siafakas; P Markoulatos; G T Papageorgiou; C Kourtis; E Chatzichristou; C Economou; S Levidiotou
Journal:  Appl Environ Microbiol       Date:  2005-01       Impact factor: 4.792

2.  Application of PCR-based methods to assess the infectivity of enteric viruses in environmental samples.

Authors:  Roberto A Rodríguez; Ian L Pepper; Charles P Gerba
Journal:  Appl Environ Microbiol       Date:  2008-11-14       Impact factor: 4.792

3.  Molecular identification and full genome analysis of an echovirus 7 strain isolated from the environment in Greece.

Authors:  Zaharoula Kyriakopoulou; Evaggelos Dedepsidis; Vaia Pliaka; Panayotis Mastorakos; Anastassia Stamati; Anastassia Pratti; Stamatina Levidiotou-Stefanou; Panayotis Markoulatos
Journal:  Virus Genes       Date:  2010-01-22       Impact factor: 2.332

4.  Detection method for avian influenza viruses in water.

Authors:  Maria Rönnqvist; Thedi Ziegler; Carl-Henrik von Bonsdorff; Leena Maunula
Journal:  Food Environ Virol       Date:  2011-12-22       Impact factor: 2.778

5.  Detection of viral pathogens by reverse transcriptase PCR and of microbial indicators by standard methods in the canals of the Florida Keys.

Authors:  D W Griffin; C J Gibson; E K Lipp; K Riley; J H Paul; J B Rose
Journal:  Appl Environ Microbiol       Date:  1999-09       Impact factor: 4.792

Review 6.  Enteric viruses of humans and animals in aquatic environments: health risks, detection, and potential water quality assessment tools.

Authors:  Theng-Theng Fong; Erin K Lipp
Journal:  Microbiol Mol Biol Rev       Date:  2005-06       Impact factor: 11.056

7.  Cocirculation of two transmission lineages of echovirus 6 in jinan, china, as revealed by environmental surveillance and sequence analysis.

Authors:  Zexin Tao; Haiyan Wang; Yan Li; Aiqiang Xu; Yong Zhang; Lizhi Song; Hiromu Yoshida; Qing Xu; Jing Yang; Yan Zhang; Yao Liu; Lei Feng; Wenbo Xu
Journal:  Appl Environ Microbiol       Date:  2011-04-08       Impact factor: 4.792

8.  New electropositive filter for concentrating enteroviruses and noroviruses from large volumes of water.

Authors:  Mohammad R Karim; Eric R Rhodes; Nichole Brinkman; Larry Wymer; G Shay Fout
Journal:  Appl Environ Microbiol       Date:  2009-02-13       Impact factor: 4.792

Review 9.  Pathogenic human viruses in coastal waters.

Authors:  Dale W Griffin; Kim A Donaldson; John H Paul; Joan B Rose
Journal:  Clin Microbiol Rev       Date:  2003-01       Impact factor: 26.132

10.  Occurrence of coliphage in raw wastewater and in ambient water: A meta-analysis.

Authors:  Sharon P Nappier; Tao Hong; Audrey Ichida; Alexandra Goldstone; Sorina E Eftim
Journal:  Water Res       Date:  2019-01-11       Impact factor: 11.236

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