Literature DB >> 9268669

Structure of keyhole limpet hemocyanin type 1 (KLH1) at 15 A resolution by electron cryomicroscopy and angular reconstitution.

E V Orlova1, P Dube, J R Harris, E Beckman, F Zemlin, J Markl, M van Heel.   

Abstract

A three-dimensional reconstruction of keyhole limpet hemocyanin type 1 (KLH1) has been obtained using electron cryomicroscopy at liquid helium temperatures and single particle image processing. The use of a high-contrast embedding medium, 1% (w/v) glucose and 2% (w/v) ammonium molybdate (pH 7.0), enables high-resolution electron micrographs to be recorded close to focus, i.e. with excellent transfer of high-resolution information, while maintaining enough image contrast to localise the individual macromolecules in the images. When low-pass filtered to approximately 45 A resolution, the new 15 A resolution reconstruction is very similar to the earlier reconstructions of gastropodan hemocyanins of specimens embedded in vitreous ice. The map shows much detail and reveals many new symmetry elements in this very large cylindrical molluscan hemocyanin. The full KLH1 didecamer has D5 pointgroup symmetry, yet within the KLH1 decameric half-molecules local 2-fold axes have emerged that make the wall of the KLH1 decamer, in spite of its having an exact C5 symmetry only, resemble the D5-symmetric wall of the decameric cephalopod hemocyanins. In fact, the outside of each tier of this six-tiered gastropodan hemocyanin was found to have an approximate D5 symmetry. Local 2-fold axes also relate the "functional units" within the dimeric "morphological units" of the wall and the collar areas of the 8 MDa KLH1 molecule. Certain local-symmetry-related surface motifs may be present up to 60 times on the outside wall of this highly symmetric cylindrical hemocyanin. Keyhole limpet hemocyanin is used clinically as an immunostimulant. The very strong immune reaction elicited by this hemocyanin may be associated with its intricate hierarchy of local-symmetry components.

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Year:  1997        PMID: 9268669     DOI: 10.1006/jmbi.1997.1182

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  40 in total

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Authors:  Richard F Collins; Robert C Ford; Ashraf Kitmitto; Ranveig O Olsen; Tone Tønjum; Jeremy P Derrick
Journal:  J Bacteriol       Date:  2003-04       Impact factor: 3.490

5.  Three-dimensional cryo-electron microscopy localization of EF2 in the Saccharomyces cerevisiae 80S ribosome at 17.5 A resolution.

Authors:  M G Gomez-Lorenzo; C M Spahn; R K Agrawal; R A Grassucci; P Penczek; K Chakraburtty; J P Ballesta; J L Lavandera; J F Garcia-Bustos; J Frank
Journal:  EMBO J       Date:  2000-06-01       Impact factor: 11.598

6.  Cryo-EM reveals an active role for aminoacyl-tRNA in the accommodation process.

Authors:  Mikel Valle; Jayati Sengupta; Neil K Swami; Robert A Grassucci; Nils Burkhardt; Knud H Nierhaus; Rajendra K Agrawal; Joachim Frank
Journal:  EMBO J       Date:  2002-07-01       Impact factor: 11.598

7.  The 3D structure of the fusion primed Sendai F-protein determined by electron cryomicroscopy.

Authors:  Kai Ludwig; Bolormaa Baljinnyam; Andreas Herrmann; Christoph Böttcher
Journal:  EMBO J       Date:  2003-08-01       Impact factor: 11.598

8.  Visualization of ribosome-recycling factor on the Escherichia coli 70S ribosome: functional implications.

Authors:  Rajendra K Agrawal; Manjuli R Sharma; Michael C Kiel; Go Hirokawa; Timothy M Booth; Christian M T Spahn; Robert A Grassucci; Akira Kaji; Joachim Frank
Journal:  Proc Natl Acad Sci U S A       Date:  2004-06-03       Impact factor: 11.205

Review 9.  Generalized single-particle cryo-EM--a historical perspective.

Authors:  Joachim Frank
Journal:  Microscopy (Oxf)       Date:  2015-11-12       Impact factor: 1.571

10.  Structural aspects of RbfA action during small ribosomal subunit assembly.

Authors:  Partha P Datta; Daniel N Wilson; Masahito Kawazoe; Neil K Swami; Tatsuya Kaminishi; Manjuli R Sharma; Timothy M Booth; Chie Takemoto; Paola Fucini; Shigeyuki Yokoyama; Rajendra K Agrawal
Journal:  Mol Cell       Date:  2007-11-09       Impact factor: 17.970

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