Literature DB >> 9245418

Structure and dynamics of pentaglycyl bridges in the cell walls of Staphylococcus aureus by 13C-15N REDOR NMR.

G Tong1, Y Pan, H Dong, R Pryor, G E Wilson, J Schaefer.   

Abstract

Whole cells and cell-wall fractions of Staphylococcusaureus have been labeled by various combinations of [1-13C]glycine, [15N]glycine, L--6-13C-lysine, L--6-15N-lysine, D--1-13C-alanine, and D--15N-alanine. The resulting materials have been examined using 13C and 15N solid-state, magic-angle spinning NMR techniques including cross-polarization, double cross-polarization, and rotational-echo double resonance. The results of these measurements indicate that the peptidoglycan glycyl bridges are complete (five units long) and form cross-links between three-quarters of all peptide stems. The pentaglycyl bridges are immobilized in lyophilized cell-wall fractions in a compact conformation with inter-residue spacings comparable to those of an alpha helix. The bridges have a similar compact conformation in intact whole cells, regardless of whether the cells have been lyophilized or were hydrated and frozen at -10 degrees C. The bridges are also in a time-averaged compact conformation in whole cells at 0 degrees C but with sizable structural fluctuations associated with local mobility. A small fraction of bridges are in extended-chain conformations.

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Year:  1997        PMID: 9245418     DOI: 10.1021/bi970495d

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  33 in total

Review 1.  In-Cell Solid-State NMR: An Emerging Technique for the Study of Biological Membranes.

Authors:  Xavier L Warnet; Alexandre A Arnold; Isabelle Marcotte; Dror E Warschawski
Journal:  Biophys J       Date:  2015-12-15       Impact factor: 4.033

2.  Nutrient-dependent structural changes in S. aureus peptidoglycan revealed by solid-state NMR spectroscopy.

Authors:  Xiaoxue Zhou; Lynette Cegelski
Journal:  Biochemistry       Date:  2012-10-02       Impact factor: 3.162

3.  Uniformity of glycyl bridge lengths in the mature cell walls of fem mutants of methicillin-resistant Staphylococcus aureus.

Authors:  Shasad Sharif; Sung Joon Kim; Harald Labischinski; Jiawei Chen; Jacob Schaefer
Journal:  J Bacteriol       Date:  2013-01-18       Impact factor: 3.490

4.  The Carboxyl Terminus of Eremomycin Facilitates Binding to the Non-d-Ala-d-Ala Segment of the Peptidoglycan Pentapeptide Stem.

Authors:  James Chang; Hongyu Zhou; Maria Preobrazhenskaya; Peng Tao; Sung Joon Kim
Journal:  Biochemistry       Date:  2016-06-07       Impact factor: 3.162

5.  Characterization of the tertiary structure of the peptidoglycan of Enterococcus faecalis.

Authors:  Hao Yang; Manmilan Singh; Sung Joon Kim; Jacob Schaefer
Journal:  Biochim Biophys Acta Biomembr       Date:  2017-08-05       Impact factor: 3.747

6.  The isotridecanyl side chain of plusbacin-A3 is essential for the transglycosylase inhibition of peptidoglycan biosynthesis.

Authors:  Sung Joon Kim; Manmilan Singh; Aaron Wohlrab; Tsyr-Yan Yu; Gary J Patti; Robert D O'Connor; Michael VanNieuwenhze; Jacob Schaefer
Journal:  Biochemistry       Date:  2013-03-05       Impact factor: 3.162

7.  Frequency-selective REDOR and spin-diffusion relays in uniformly labeled whole cells.

Authors:  David M Rice; Joseph A H Romaniuk; Lynette Cegelski
Journal:  Solid State Nucl Magn Reson       Date:  2015-10-14       Impact factor: 2.293

8.  Method revealing bacterial cell-wall architecture by time-dependent isotope labeling and quantitative liquid chromatography/mass spectrometry.

Authors:  Gary J Patti; Jiawei Chen; Michael L Gross
Journal:  Anal Chem       Date:  2009-04-01       Impact factor: 6.986

9.  Characterization of structural variations in the peptidoglycan of vancomycin-susceptible Enterococcus faecium: understanding glycopeptide-antibiotic binding sites using mass spectrometry.

Authors:  Gary J Patti; Jiawei Chen; Jacob Schaefer; Michael L Gross
Journal:  J Am Soc Mass Spectrom       Date:  2008-07-01       Impact factor: 3.109

10.  REDOR NMR characterization of DNA packaging in bacteriophage T4.

Authors:  Tsyr-Yan Yu; Jacob Schaefer
Journal:  J Mol Biol       Date:  2008-08-05       Impact factor: 5.469

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