Literature DB >> 9244287

Identification and mutation of a gene required for glycerate kinase activity from a facultative methylotroph, Methylobacterium extorquens AM1.

L Chistoserdova1, M E Lidstrom.   

Abstract

A gene (gckA) responsible for the activity of glycerate kinase has been identified within a chromosomal fragment of the serine cycle methylotroph Methylobacterium extorquens AM1. A mutation in gckA leads to a specific C1-negative phenotype. The polypeptide sequence derived from gckA showed high similarity to a product of ttuD essential for tartrate metabolism in Agrobacterium vitis. Our data suggest that gckA and ttuD might be structural genes for glycerate kinase and that the serine cycle and the tartrate utilization pathway share a series of reactions.

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Year:  1997        PMID: 9244287      PMCID: PMC179346          DOI: 10.1128/jb.179.15.4946-4948.1997

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  17 in total

1.  PREPARATION OF TRANSFORMING DEOXYRIBONUCLEIC ACID BY PHENOL TREATMENT.

Authors:  H SAITO; K I MIURA
Journal:  Biochim Biophys Acta       Date:  1963-08-20

2.  A new spectrophotometric assay for protein in cell extracts.

Authors:  V F Kalb; R W Bernlohr
Journal:  Anal Biochem       Date:  1977-10       Impact factor: 3.365

3.  The purification of glycerate kinase from Hyphomicrobium sp. and Pseudomonas AM1: product identification.

Authors:  B Hill; M M Attwood
Journal:  J Gen Microbiol       Date:  1974-07

4.  An absolute method for protein determination based on difference in absorbance at 235 and 280 nm.

Authors:  J R Whitaker; P E Granum
Journal:  Anal Biochem       Date:  1980-11-15       Impact factor: 3.365

Review 5.  Hybridization of nucleic acids immobilized on solid supports.

Authors:  J Meinkoth; G Wahl
Journal:  Anal Biochem       Date:  1984-05-01       Impact factor: 3.365

6.  Molecular characterization of a chromosomal region involved in the oxidation of acetyl-CoA to glyoxylate in the isocitrate-lyase-negative methylotroph Methylobacterium extorquens AM1.

Authors:  Ludmila V Chistoserdova; Mary E Lidstrom
Journal:  Microbiology (Reading)       Date:  1996-06       Impact factor: 2.777

7.  Genetics of the serine cycle in Methylobacterium extorquens AM1: cloning, sequence, mutation, and physiological effect of glyA, the gene for serine hydroxymethyltransferase.

Authors:  L V Chistoserdova; M E Lidstrom
Journal:  J Bacteriol       Date:  1994-11       Impact factor: 3.490

8.  Sequence and mutational analysis of a tartrate utilization operon from Agrobacterium vitis.

Authors:  P Crouzet; L Otten
Journal:  J Bacteriol       Date:  1995-11       Impact factor: 3.490

9.  Purification and characterization of glycerate kinase from a serine-producing methylotroph, Hyphomicrobium methylovorum GM2.

Authors:  T Yoshida; K Fukuta; T Mitsunaga; H Yamada; Y Izumi
Journal:  Eur J Biochem       Date:  1992-12-15

10.  Microbial metabolism of C 1 and C 2 compounds. The involvement of glycollate in the metabolism of ethanol and of acetate by Pseudomonas AM1.

Authors:  P M Dunstan; C Anthony; W T Drabble
Journal:  Biochem J       Date:  1972-06       Impact factor: 3.857

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  12 in total

Review 1.  Methylotrophy in Methylobacterium extorquens AM1 from a genomic point of view.

Authors:  Ludmila Chistoserdova; Sung-Wei Chen; Alla Lapidus; Mary E Lidstrom
Journal:  J Bacteriol       Date:  2003-05       Impact factor: 3.490

2.  Influence of the sigmaB stress factor and yxaB, the gene for a putative exopolysaccharide synthase under sigmaB Control, on biofilm formation.

Authors:  Krzysztofa Nagórska; Krzysztof Hinc; Mark A Strauch; Michał Obuchowski
Journal:  J Bacteriol       Date:  2008-03-07       Impact factor: 3.490

3.  A unique highly thermostable 2-phosphoglycerate forming glycerate kinase from the hyperthermophilic archaeon Pyrococcus horikoshii: gene cloning, expression and characterization.

Authors:  Bo Liu; Ye Hong; Lei Wu; Zhuo Li; Jinfeng Ni; Duohong Sheng; Yulong Shen
Journal:  Extremophiles       Date:  2007-06-12       Impact factor: 2.395

4.  Alternative route for glyoxylate consumption during growth on two-carbon compounds by Methylobacterium extorquens AM1.

Authors:  Yoko Okubo; Song Yang; Ludmila Chistoserdova; Mary E Lidstrom
Journal:  J Bacteriol       Date:  2010-01-29       Impact factor: 3.490

5.  Oxalyl-coenzyme A reduction to glyoxylate is the preferred route of oxalate assimilation in Methylobacterium extorquens AM1.

Authors:  Kathrin Schneider; Elizabeth Skovran; Julia A Vorholt
Journal:  J Bacteriol       Date:  2012-04-06       Impact factor: 3.490

6.  Glyoxylate regeneration pathway in the methylotroph Methylobacterium extorquens AM1.

Authors:  Natalia Korotkova; Ludmila Chistoserdova; Vladimir Kuksa; Mary E Lidstrom
Journal:  J Bacteriol       Date:  2002-03       Impact factor: 3.490

7.  QscR-mediated transcriptional activation of serine cycle genes in Methylobacterium extorquens AM1.

Authors:  Marina G Kalyuzhnaya; Mary E Lidstrom
Journal:  J Bacteriol       Date:  2005-11       Impact factor: 3.490

8.  Glycerate 2-kinase of Thermotoga maritima and genomic reconstruction of related metabolic pathways.

Authors:  Chen Yang; Dmitry A Rodionov; Irina A Rodionova; Xiaoqing Li; Andrei L Osterman
Journal:  J Bacteriol       Date:  2007-12-21       Impact factor: 3.490

9.  QscR, a LysR-type transcriptional regulator and CbbR homolog, is involved in regulation of the serine cycle genes in Methylobacterium extorquens AM1.

Authors:  Marina G Kalyuzhnaya; Mary E Lidstrom
Journal:  J Bacteriol       Date:  2003-02       Impact factor: 3.490

10.  Glycerate kinase of the hyperthermophilic archaeon Thermoproteus tenax: new insights into the phylogenetic distribution and physiological role of members of the three different glycerate kinase classes.

Authors:  Daniel Kehrer; Hatim Ahmed; Henner Brinkmann; Bettina Siebers
Journal:  BMC Genomics       Date:  2007-08-31       Impact factor: 3.969

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