Literature DB >> 9242923

Subtractive cloning: past, present, and future.

C G Sagerström1, B I Sun, H L Sive.   

Abstract

Subtractive cloning is a powerful technique for isolating genes expressed or present in one cell population but not in another. This method and a related one termed positive selection have their origins in nucleic acid reassociation techniques. We discuss the history of subtractive techniques, and fundamental information about the nucleic acid composition of cells that came out of reassociation analyses. We then explore current techniques for subtractive cloning and positive selection, discussing the merits of each. These techniques include cDNA library-based techniques and PCR-based techniques. Finally, we briefly discuss the future of subtractive cloning and new approaches that may augment or supersede current methods.

Mesh:

Year:  1997        PMID: 9242923     DOI: 10.1146/annurev.biochem.66.1.751

Source DB:  PubMed          Journal:  Annu Rev Biochem        ISSN: 0066-4154            Impact factor:   23.643


  20 in total

1.  Identification of calcium- and nitric oxide-regulated genes by differential analysis of library expression (DAzLE).

Authors:  Huiwu Li; Xiujing Gu; Valina L Dawson; Ted M Dawson
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-30       Impact factor: 11.205

2.  Solid phase subtractive cloning in differentially expressed genes identification.

Authors:  Oscar F D'Urso; Pietro I D'Urso; Carlo Storelli; Santo Marsigliante
Journal:  Mol Biol Rep       Date:  2009-04-03       Impact factor: 2.316

3.  Reciprocal subtraction differential RNA display: an efficient and rapid procedure for isolating differentially expressed gene sequences.

Authors:  D C Kang; R LaFrance; Z Z Su; P B Fisher
Journal:  Proc Natl Acad Sci U S A       Date:  1998-11-10       Impact factor: 11.205

4.  A simulation of subtractive hybridization.

Authors:  T J Cho; S S Park
Journal:  Nucleic Acids Res       Date:  1998-03-15       Impact factor: 16.971

5.  RaSH, a rapid subtraction hybridization approach for identifying and cloning differentially expressed genes.

Authors:  H Jiang; D C Kang; D Alexandre; P B Fisher
Journal:  Proc Natl Acad Sci U S A       Date:  2000-11-07       Impact factor: 11.205

6.  Detection of differential gene expression in biofilm-forming versus planktonic populations of Staphylococcus aureus using micro-representational-difference analysis.

Authors:  P Becker; W Hufnagle; G Peters; M Herrmann
Journal:  Appl Environ Microbiol       Date:  2001-07       Impact factor: 4.792

Review 7.  Comprehensive gene expression analysis by transcript profiling.

Authors:  Jonathan Donson; Yiwen Fang; Gregg Espiritu-Santo; Weimei Xing; Andres Salazar; Susie Miyamoto; Veronica Armendarez; Wayne Volkmuth
Journal:  Plant Mol Biol       Date:  2002-01       Impact factor: 4.076

Review 8.  The path from molecular indicators of exposure to describing dynamic biological systems in an aquatic organism: microarrays and the fathead minnow.

Authors:  Ann L Miracle; Gregory P Toth; David L Lattier
Journal:  Ecotoxicology       Date:  2003-12       Impact factor: 2.823

9.  Identification of a differentially expressed oligopeptide binding protein (OppA2) in Streptococcus uberis by representational difference analysis of cDNA.

Authors:  D L Taylor; P N Ward; C D Rapier; J A Leigh; L D Bowler
Journal:  J Bacteriol       Date:  2003-09       Impact factor: 3.490

10.  An abundance of ubiquitously expressed genes revealed by tissue transcriptome sequence data.

Authors:  Daniel Ramsköld; Eric T Wang; Christopher B Burge; Rickard Sandberg
Journal:  PLoS Comput Biol       Date:  2009-12-11       Impact factor: 4.475

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