Literature DB >> 9237357

A member of the immunoglobulin superfamily in bacteriophage T4.

A Bateman1, S R Eddy, V V Mesyanzhinov.   

Abstract

We report a prediction that the highly immunogenic outer capsid (Hoc) protein of the prokaryotic phage T4 contains three tandem immunoglobulin-like domains. Immunoglobulin-like folds have previously been identified in prokaryotic proteins but these share no recognizable sequence similarity with eukaryotic immunoglobulin superfamily (IgSF) folds, and may represent products of convergent evolution. In contrast, the Hoc immunoglobulin-like folds are proposed, based on immunoglobulin-like sequence consensus matches detected by hidden Markov modeling. We propose that the Hoc immunoglobulin-like domains and eukaryotic immunoglobulin-like domains are likely to be related by divergence from a common ancestor.

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Year:  1997        PMID: 9237357     DOI: 10.1023/a:1007977503658

Source DB:  PubMed          Journal:  Virus Genes        ISSN: 0920-8569            Impact factor:   2.332


  14 in total

1.  The SWISS-PROT protein sequence data bank.

Authors:  A Bairoch; B Boeckmann
Journal:  Nucleic Acids Res       Date:  1991-04-25       Impact factor: 16.971

Review 2.  Bacteriophage T4 genetic homologies with bacteria and eucaryotes.

Authors:  H Bernstein; C Bernstein
Journal:  J Bacteriol       Date:  1989-05       Impact factor: 3.490

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Authors:  J H Wang; Y W Yan; T P Garrett; J H Liu; D W Rodgers; R L Garlick; G E Tarr; Y Husain; E L Reinherz; S C Harrison
Journal:  Nature       Date:  1990-11-29       Impact factor: 49.962

4.  The nucleotide sequence of the region of bacteriophage T4 inh(lip)-hoc genes.

Authors:  A V Kaliman; M A Khasanova; V M Kryukov; V I Tanyashin; A A Bayev
Journal:  Nucleic Acids Res       Date:  1990-07-25       Impact factor: 16.971

5.  A year in the life of the immunoglobulin superfamily.

Authors:  A F Williams
Journal:  Immunol Today       Date:  1987

6.  Refinement and analysis of the structure of the first two domains of human CD4.

Authors:  T P Garrett; J Wang; Y Yan; J Liu; S C Harrison
Journal:  J Mol Biol       Date:  1993-12-05       Impact factor: 5.469

Review 7.  The immunoglobulin fold. Structural classification, sequence patterns and common core.

Authors:  P Bork; L Holm; C Sander
Journal:  J Mol Biol       Date:  1994-09-30       Impact factor: 5.469

8.  Hidden Markov models in computational biology. Applications to protein modeling.

Authors:  A Krogh; M Brown; I S Mian; K Sjölander; D Haussler
Journal:  J Mol Biol       Date:  1994-02-04       Impact factor: 5.469

9.  Many of the immunoglobulin superfamily domains in cell adhesion molecules and surface receptors belong to a new structural set which is close to that containing variable domains.

Authors:  Y Harpaz; C Chothia
Journal:  J Mol Biol       Date:  1994-05-13       Impact factor: 5.469

10.  Bacteriophage T4 as a surface display vector.

Authors:  V P Efimov; I V Nepluev; V V Mesyanzhinov
Journal:  Virus Genes       Date:  1995       Impact factor: 2.332

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  9 in total

1.  Structure of the three N-terminal immunoglobulin domains of the highly immunogenic outer capsid protein from a T4-like bacteriophage.

Authors:  Andrei Fokine; Mohammad Z Islam; Zhihong Zhang; Valorie D Bowman; Venigalla B Rao; Michael G Rossmann
Journal:  J Virol       Date:  2011-06-01       Impact factor: 5.103

2.  Deletion of the Hoc and Soc capsid proteins affects the surface and cellular uptake properties of bacteriophage T4 derived nanoparticles.

Authors:  Kelly Robertson; Yoko Furukawa; Alison Underwood; Lindsay Black; Jinny L Liu
Journal:  Biochem Biophys Res Commun       Date:  2012-01-21       Impact factor: 3.575

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Authors:  A Kurzepa; K Dabrowska; K Switała-Jeleń; A Górski
Journal:  Folia Microbiol (Praha)       Date:  2009-03-29       Impact factor: 2.099

Review 4.  Molecular architecture of tailed double-stranded DNA phages.

Authors:  Andrei Fokine; Michael G Rossmann
Journal:  Bacteriophage       Date:  2014-02-21

5.  A multivalent adsorption apparatus explains the broad host range of phage phi92: a comprehensive genomic and structural analysis.

Authors:  David Schwarzer; Falk F R Buettner; Christopher Browning; Sergey Nazarov; Wolfgang Rabsch; Andrea Bethe; Astrid Oberbeck; Valorie D Bowman; Katharina Stummeyer; Martina Mühlenhoff; Petr G Leiman; Rita Gerardy-Schahn
Journal:  J Virol       Date:  2012-07-11       Impact factor: 5.103

6.  Functional analysis of the highly antigenic outer capsid protein, Hoc, a virus decoration protein from T4-like bacteriophages.

Authors:  Taheri Sathaliyawala; Mohammad Z Islam; Qin Li; Andrei Fokine; Michael G Rossmann; Venigalla B Rao
Journal:  Mol Microbiol       Date:  2010-05-19       Impact factor: 3.501

Review 7.  Emulating interactions between microorganisms and tumor microenvironment to develop cancer theranostics.

Authors:  Tongmeng Jiang; Tao Yang; Yingfan Chen; Yao Miao; Yajing Xu; Honglin Jiang; Mingying Yang; Chuanbin Mao
Journal:  Theranostics       Date:  2022-03-14       Impact factor: 11.600

8.  Tall tails: cryo-electron microscopy of phage tail DNA ejection conduits.

Authors:  Joshua M Hardy; Rhys A Dunstan; Trevor Lithgow; Fasséli Coulibaly
Journal:  Biochem Soc Trans       Date:  2022-02-28       Impact factor: 4.919

Review 9.  Bacteriophage interactions with phagocytes and their potential significance in experimental therapy.

Authors:  Aneta Kurzepa; Krystyna Dabrowska; Grzegorz Skaradziński; Andrzej Górski
Journal:  Clin Exp Med       Date:  2009-01-30       Impact factor: 3.984

  9 in total

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