Literature DB >> 9235973

The predischarge chromophore in bacteriorhodopsin: a 15N solid-state NMR study of the L photointermediate.

J G Hu1, B Q Sun, A T Petkova, R G Griffin, J Herzfeld.   

Abstract

The L550 intermediate in the bacteriorhodopsin (bR) photocycle has drawn much attention with respect to the mechanism of light-driven proton transport because it selectively releases the Schiff base (SB) proton to the extracellular proton channel in the L-->M transition. Here we extend our solid-state NMR studies of bR photocycle intermediates to the L state. Under conditions that stabilize L550, a new SB signal is detected in the 15N NMR spectrum which disappears upon thermal relaxation. This signal is in the range for a protonated SB, but downfield from the SB signals of bR568 and N520. Since steric interactions would have the opposite effect on shielding, the data argue against a 13,14-dicis chromophore in L550. Comparison with the 15N chemical shifts of halide salts of protonated Schiff bases (pSB's) of retinal suggests that the interaction of the SB with its counterion is significantly stronger in L550 than in N520 (which in turn is stronger than in bR568). This is consistent with models of the early photocycle in which the electrostatic interaction between the SB and its counterion constitutes an important constraint. Although the L counterion interaction is comparable to that of a 6-s-trans,13-cis chloride salt, the visible spectrum is strongly red-shifted from the lambdamax = 491 nm of the chloride. This suggests some double bond strain in L550, particularly about the C=N bond. This strain is apparently gone in the N intermediate, which has a normal relationship between the 15N chemical shift and lambdamax. Such a relaxed chromophore is consistent with orientation of the SB proton toward the cytoplasmic surface in the N intermediate.

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Year:  1997        PMID: 9235973     DOI: 10.1021/bi970416y

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  12 in total

1.  Control of the pump cycle in bacteriorhodopsin: mechanisms elucidated by solid-state NMR of the D85N mutant.

Authors:  Mary E Hatcher; Jingui G Hu; Marina Belenky; Peter Verdegem; Johan Lugtenburg; Robert G Griffin; Judith Herzfeld
Journal:  Biophys J       Date:  2002-02       Impact factor: 4.033

2.  Structural changes during the formation of early intermediates in the bacteriorhodopsin photocycle.

Authors:  Shigehiko Hayashi; Emad Tajkhorshid; Klaus Schulten
Journal:  Biophys J       Date:  2002-09       Impact factor: 4.033

Review 3.  Chemical shift tensor - the heart of NMR: Insights into biological aspects of proteins.

Authors:  Hazime Saitô; Isao Ando; Ayyalusamy Ramamoorthy
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2010-05-07       Impact factor: 9.795

4.  Structural changes in the L photointermediate of bacteriorhodopsin.

Authors:  Janos K Lanyi; Brigitte Schobert
Journal:  J Mol Biol       Date:  2006-11-10       Impact factor: 5.469

5.  Characterisation of Schiff base and chromophore in green proteorhodopsin by solid-state NMR.

Authors:  Nicole Pfleger; Mark Lorch; Andreas C Woerner; Sarika Shastri; Clemens Glaubitz
Journal:  J Biomol NMR       Date:  2007-10-30       Impact factor: 2.835

6.  Retinal Configuration of ppR Intermediates Revealed by Photoirradiation Solid-State NMR and DFT.

Authors:  Yoshiteru Makino; Izuru Kawamura; Takashi Okitsu; Akimori Wada; Naoki Kamo; Yuki Sudo; Kazuyoshi Ueda; Akira Naito
Journal:  Biophys J       Date:  2018-07-03       Impact factor: 4.033

7.  Functional and shunt states of bacteriorhodopsin resolved by 250 GHz dynamic nuclear polarization-enhanced solid-state NMR.

Authors:  Vikram S Bajaj; Melody L Mak-Jurkauskas; Marina Belenky; Judith Herzfeld; Robert G Griffin
Journal:  Proc Natl Acad Sci U S A       Date:  2009-05-27       Impact factor: 11.205

8.  Primary Transfer Step in the Light-Driven Ion Pump Bacteriorhodopsin: An Irreversible U-Turn Revealed by Dynamic Nuclear Polarization-Enhanced Magic Angle Spinning NMR.

Authors:  Qing Zhe Ni; Thach V Can; Eugenio Daviso; Marina Belenky; Robert G Griffin; Judith Herzfeld
Journal:  J Am Chem Soc       Date:  2018-03-12       Impact factor: 15.419

9.  Energy transformations early in the bacteriorhodopsin photocycle revealed by DNP-enhanced solid-state NMR.

Authors:  Melody L Mak-Jurkauskas; Vikram S Bajaj; Melissa K Hornstein; Marina Belenky; Robert G Griffin; Judith Herzfeld
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-14       Impact factor: 11.205

10.  A role for internal water molecules in proton affinity changes in the Schiff base and Asp85 for one-way proton transfer in bacteriorhodopsin.

Authors:  Joel E Morgan; Robert B Gennis; Akio Maeda
Journal:  Photochem Photobiol       Date:  2008-06-28       Impact factor: 3.421

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