Literature DB >> 9228942

A low energy short hydrogen bond in very high resolution structures of protein receptor--phosphate complexes.

Z Wang, H Luecke, N Yao, F A Quiocho.   

Abstract

A very short hydrogen bond between an Asp and a phosphate is established in two high resolution structures (0.98 and 1.05 A). A mutant complex that changes the Asp to an Asn, which forms a normal hydrogen bond, has a similar free energy of binding to the wild type complex, suggesting that the contribution of the short hydrogen bond is not extraordinarily strong.

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Year:  1997        PMID： 9228942     DOI： 10.1038/nsb0797-519

Source DB:  PubMed          Journal:  Nat Struct Biol        ISSN： 1072-8368


  22 in total

1.  Evaluation of the relative stability of liganded versus ligand-free protein conformations using Simplicial Neighborhood Analysis of Protein Packing (SNAPP) method.

Authors:  Douglas B Sherman; Shuxing Zhang; J Bruce Pitner; Alexander Tropsha
Journal:  Proteins       Date:  2004-09-01

Review 2.  For whom the bell tolls? DING proteins in health and disease.

Authors:  Anne Berna; François Bernier; Eric Chabrière; Mikael Elias; Ken Scott; Andrew Suh
Journal:  Cell Mol Life Sci       Date:  2009-03-17       Impact factor: 9.261

3.  Dominant role of local dipolar interactions in phosphate binding to a receptor cleft with an electronegative charge surface: equilibrium, kinetic, and crystallographic studies.

Authors:  P S Ledvina; A L Tsai; Z Wang; E Koehl; F A Quiocho
Journal:  Protein Sci       Date:  1998-12       Impact factor: 6.725

Review 4.  Artificial receptors for the recognition of phosphorylated molecules.

Authors:  Amanda E Hargrove; Sonia Nieto; Tianzhi Zhang; Jonathan L Sessler; Eric V Anslyn
Journal:  Chem Rev       Date:  2011-09-12       Impact factor: 60.622

5.  Predicting ligand-binding function in families of bacterial receptors.

Authors:  J M Johnson; G M Church
Journal:  Proc Natl Acad Sci U S A       Date:  2000-04-11       Impact factor: 11.205

6.  Binding of phosphate and pyrophosphate ions at the active site of human angiogenin as revealed by X-ray crystallography.

Authors:  D D Leonidas; G B Chavali; A M Jardine; S Li; R Shapiro; K R Acharya
Journal:  Protein Sci       Date:  2001-08       Impact factor: 6.725

7.  Elucidating the Phosphate Binding Mode of Phosphate-Binding Protein: The Critical Effect of Buffer Solution.

Authors:  Rui Qi; Zhifeng Jing; Chengwen Liu; Jean-Philip Piquemal; Kevin N Dalby; Pengyu Ren
Journal:  J Phys Chem B       Date:  2018-06-11       Impact factor: 2.991

8.  The molecular basis of phosphate discrimination in arsenate-rich environments.

Authors:  Mikael Elias; Alon Wellner; Korina Goldin-Azulay; Eric Chabriere; Julia A Vorholt; Tobias J Erb; Dan S Tawfik
Journal:  Nature       Date:  2012-10-03       Impact factor: 49.962

9.  Crystallization and preliminary X-ray diffraction analysis of the phosphate-binding protein PhoX from Xanthomonas citri.

Authors:  Vanessa R Pegos; Francisco Javier Medrano; Andrea Balan
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-11-14       Impact factor: 1.056

10.  Conformational changes of glucose/galactose-binding protein illuminated by open, unliganded, and ultra-high-resolution ligand-bound structures.

Authors:  M Jack Borrok; Laura L Kiessling; Katrina T Forest
Journal:  Protein Sci       Date:  2007-05-01       Impact factor: 6.725
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