Literature DB >> 9227344

Automated location of dysplastic fields in colorectal histology using image texture analysis.

P W Hamilton1, P H Bartels, D Thompson, N H Anderson, R Montironi, J M Sloan.   

Abstract

Automation in histopathology is an attractive concept and recent advances in the application of computerized expert systems and machine vision have made automated image analysis of histological images possible. Systems capable of complete automation not only require the ability to segment tissue features and grade histological abnormalities, but, must also be capable of locating diagnostically useful areas from within complex histological scenes. This is the first stage of the diagnostic process. The object of this study was to develop criteria for the automatic identification of focal areas of colorectal dysplasia from a background of histologically normal tissue. Fields of view representing normal colorectal mucosa (n = 120) and dysplastic mucosa (n = 120) were digitally captured and subjected to image texture analysis. Two features were selected as being the most important in the discrimination of normal and adenomatous colorectal mucosa. The first was a feature of the co-occurrence matrix and the second was the number of low optical density pixels in the image. A linear classification rule defined using these two features was capable of correctly classifying 86 per cent of a series of training images into their correct groups. In addition, large histological scenes were digitally captured, split into their component images, analysed according to texture, and classified as normal or abnormal using the previously defined classification rule. Maps of the histological scenes were constructed and in most cases, dysplastic colorectal mucosa was correctly identified on the basis of image texture: 83 per cent of test images were correctly classified. This study demonstrates that abnormalities in low-power tissue morphology can be identified using quantitative image analysis. The identification of diagnostically useful fields advances the potential of automated systems in histopathology: these regions could than be scrutinized at high power using knowledge-guided image segmentation for disease grading. Systems of this kind have the potential to provide objectivity, unbiased sampling, and valuable diagnostic decision support.

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Year:  1997        PMID: 9227344     DOI: 10.1002/(SICI)1096-9896(199705)182:1<68::AID-PATH811>3.0.CO;2-N

Source DB:  PubMed          Journal:  J Pathol        ISSN: 0022-3417            Impact factor:   7.996


  11 in total

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Authors:  Cemal Cagatay Bilgin; Peter Bullough; George E Plopper; Bülent Yener
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2.  SHIRAZ: an automated histology image annotation system for zebrafish phenomics.

Authors:  Brian A Canada; Georgia K Thomas; Keith C Cheng; James Z Wang
Journal:  Multimed Tools Appl       Date:  2010-10-24       Impact factor: 2.757

3.  Stain Normalization using Sparse AutoEncoders (StaNoSA): Application to digital pathology.

Authors:  Andrew Janowczyk; Ajay Basavanhally; Anant Madabhushi
Journal:  Comput Med Imaging Graph       Date:  2016-05-16       Impact factor: 4.790

4.  Texture analysis of fluorescence microscopic images of colonic tissue sections.

Authors:  V Atlamazoglou; D Yova; N Kavantzas; S Loukas
Journal:  Med Biol Eng Comput       Date:  2001-03       Impact factor: 3.079

5.  Identification of tumor epithelium and stroma in tissue microarrays using texture analysis.

Authors:  Nina Linder; Juho Konsti; Riku Turkki; Esa Rahtu; Mikael Lundin; Stig Nordling; Caj Haglund; Timo Ahonen; Matti Pietikäinen; Johan Lundin
Journal:  Diagn Pathol       Date:  2012-03-02       Impact factor: 2.644

6.  Coupled analysis of in vitro and histology tissue samples to quantify structure-function relationship.

Authors:  Evrim Acar; George E Plopper; Bülent Yener
Journal:  PLoS One       Date:  2012-03-30       Impact factor: 3.240

7.  Towards an automated virtual slide screening: theoretical considerations and practical experiences of automated tissue-based virtual diagnosis to be implemented in the Internet.

Authors:  Klaus Kayser; Dominik Radziszowski; Piotr Bzdyl; Rainer Sommer; Gian Kayser
Journal:  Diagn Pathol       Date:  2006-06-10       Impact factor: 2.644

8.  Assessment of tumour viability in human lung cancer xenografts with texture-based image analysis.

Authors:  Riku Turkki; Nina Linder; Tanja Holopainen; Yinhai Wang; Anne Grote; Mikael Lundin; Kari Alitalo; Johan Lundin
Journal:  J Clin Pathol       Date:  2015-05-28       Impact factor: 3.411

9.  Automated tumor analysis for molecular profiling in lung cancer.

Authors:  Peter W Hamilton; Yinhai Wang; Clinton Boyd; Jacqueline A James; Maurice B Loughrey; Joseph P Hougton; David P Boyle; Paul Kelly; Perry Maxwell; David McCleary; James Diamond; Darragh G McArt; Jonathon Tunstall; Peter Bankhead; Manuel Salto-Tellez
Journal:  Oncotarget       Date:  2015-09-29

10.  An entirely automated method to score DSS-induced colitis in mice by digital image analysis of pathology slides.

Authors:  Cleopatra Kozlowski; Surinder Jeet; Joseph Beyer; Steve Guerrero; Justin Lesch; Xiaoting Wang; Jason Devoss; Lauri Diehl
Journal:  Dis Model Mech       Date:  2013-04-10       Impact factor: 5.758

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