Literature DB >> 9224613

Intronic polyadenylation in the human glycinamide ribonucleotide formyltransferase gene.

J L Kan1, R G Moran.   

Abstract

The mouse glycinamide ribonucleotide formyltransferase (GART) locus is known to produce two functional proteins, one by recognition and use of an intronic polyadenylation site and the other by downstream splicing. We now report a similar intronic polyadenylation mechanism for the human GART locus. The human GART gene has two potential polyadenylation signals within the identically located intron as that involved in intronic polyadenylation in the mouse gene. Each of the potential polyadenylation signals in the human gene was followed by an extensive polyT rich tract, but only the downstream signal was preceded by a GT tract. Only the downstream signal was utilized. The polyT rich tract which followed the functional polyadenylation site in the human GART gene was virtually identical in sequence to a similarly placed region in the mouse gene. An exact inverted complement to the polyT rich stretch following the active polyadenylation signal was found in the upstream intron of the human gene, suggesting that a hairpin loop may be involved in this intronic polyadenylation.

Entities:  

Mesh:

Substances:

Year:  1997        PMID: 9224613      PMCID: PMC146841          DOI: 10.1093/nar/25.15.3118

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  15 in total

Review 1.  Poly(A) signals.

Authors:  N Proudfoot
Journal:  Cell       Date:  1991-02-22       Impact factor: 41.582

Review 2.  How the messenger got its tail: addition of poly(A) in the nucleus.

Authors:  M Wickens
Journal:  Trends Biochem Sci       Date:  1990-07       Impact factor: 13.807

3.  The polyadenylation factor CstF-64 regulates alternative processing of IgM heavy chain pre-mRNA during B cell differentiation.

Authors:  Y Takagaki; R L Seipelt; M L Peterson; J L Manley
Journal:  Cell       Date:  1996-11-29       Impact factor: 41.582

4.  The regulated production of mu m and mu s mRNA is dependent on the relative efficiencies of mu s poly(A) site usage and the c mu 4-to-M1 splice.

Authors:  M L Peterson; R P Perry
Journal:  Mol Cell Biol       Date:  1989-02       Impact factor: 4.272

5.  Rapid production of full-length cDNAs from rare transcripts: amplification using a single gene-specific oligonucleotide primer.

Authors:  M A Frohman; M K Dush; G R Martin
Journal:  Proc Natl Acad Sci U S A       Date:  1988-12       Impact factor: 11.205

6.  A multifunctional protein possessing glycinamide ribonucleotide synthetase, glycinamide ribonucleotide transformylase, and aminoimidazole ribonucleotide synthetase activities in de novo purine biosynthesis.

Authors:  S C Daubner; J L Schrimsher; F J Schendel; M Young; S Henikoff; D Patterson; J Stubbe; S J Benkovic
Journal:  Biochemistry       Date:  1985-12-03       Impact factor: 3.162

7.  Cloning and characterization of a 12-gene cluster from Bacillus subtilis encoding nine enzymes for de novo purine nucleotide synthesis.

Authors:  D J Ebbole; H Zalkin
Journal:  J Biol Chem       Date:  1987-06-15       Impact factor: 5.157

8.  Glycinamide ribonucleotide synthetase from Escherichia coli: cloning, overproduction, sequencing, isolation, and characterization.

Authors:  Y S Cheng; Y Shen; J Rudolph; M Stern; J Stubbe; K A Flannigan; J M Smith
Journal:  Biochemistry       Date:  1990-01-09       Impact factor: 3.162

9.  De novo purine nucleotide biosynthesis: cloning of human and avian cDNAs encoding the trifunctional glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide synthetase-glycinamide ribonucleotide transformylase by functional complementation in E. coli.

Authors:  J Aimi; H Qiu; J Williams; H Zalkin; J E Dixon
Journal:  Nucleic Acids Res       Date:  1990-11-25       Impact factor: 16.971

10.  Identification and nucleotide sequence of a gene encoding 5'-phosphoribosylglycinamide transformylase in Escherichia coli K12.

Authors:  J M Smith; H A Daum
Journal:  J Biol Chem       Date:  1987-08-05       Impact factor: 5.157

View more
  3 in total

1.  No Evidence for Mutations that Deregulate GARS-AIRS-GART Protein Levels in Children with Down Syndrome.

Authors:  Disha Banerjee; Debarati Ghosh; Anindita Chatterjee; Swagata Sinha; Krishnadas Nandagopal
Journal:  Indian J Clin Biochem       Date:  2012-01-06

2.  Phylogenetic analysis and in silico characterization of the GARS-AIRS-GART gene which codes for a tri-functional enzyme protein involved in de novo purine biosynthesis.

Authors:  Disha Banerjee; Krishnadas Nandagopal
Journal:  Mol Biotechnol       Date:  2009-03-20       Impact factor: 2.695

3.  Mutations in the Chinese hamster ovary cell GART gene of de novo purine synthesis.

Authors:  Aaron J Knox; Christine Graham; John Bleskan; Gary Brodsky; David Patterson
Journal:  Gene       Date:  2008-10-21       Impact factor: 3.688

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.