Literature DB >> 9223290

Nonexponential kinetics of a single tRNAPhe molecule under physiological conditions.

Y Jia1, A Sytnik, L Li, S Vladimirov, B S Cooperman, R M Hochstrasser.   

Abstract

The fluorescence decay functions of individual, specifically labeled tRNAPhe molecules exhibit nonexponential character as a result of conformational dynamics occurring during the measurement on a single molecule. tRNAPhe conformational states that interchange much more slowly are evidenced by the distribution of lifetimes observed for many individual molecules. A structural model for the nonexponential decay indicates that the tRNAPhe-probe adduct fluctuates between two states, one of which provides conditions that quench the probe fluorescence.

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Year:  1997        PMID: 9223290      PMCID: PMC21532          DOI: 10.1073/pnas.94.15.7932

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  22 in total

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Journal:  Phys Rev Lett       Date:  1995-12-25       Impact factor: 9.161

2.  Alterations of single molecule fluorescence lifetimes in near-field optical microscopy.

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Journal:  Science       Date:  1994-07-15       Impact factor: 47.728

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Journal:  Science       Date:  1993-11-26       Impact factor: 47.728

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Journal:  J Fluoresc       Date:  1995-09       Impact factor: 2.217

Review 5.  Sorting single molecules: application to diagnostics and evolutionary biotechnology.

Authors:  M Eigen; R Rigler
Journal:  Proc Natl Acad Sci U S A       Date:  1994-06-21       Impact factor: 11.205

6.  [Preparative isolation of individual tRNA Phe by high performance liquid reversed-phase chromatography].

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Journal:  Bioorg Khim       Date:  1988-01

7.  Real time imaging of single fluorophores on moving actin with an epifluorescence microscope.

Authors:  I Sase; H Miyata; J E Corrie; J S Craik; K Kinosita
Journal:  Biophys J       Date:  1995-08       Impact factor: 4.033

8.  Probing individual molecules with confocal fluorescence microscopy.

Authors:  S Nie; D T Chiu; R N Zare
Journal:  Science       Date:  1994-11-11       Impact factor: 47.728

9.  Distance moved by transfer RNA during translocation from the A site to the P site on the ribosome.

Authors:  A E Johnson; H J Adkins; E A Matthews; C R Cantor
Journal:  J Mol Biol       Date:  1982-03-25       Impact factor: 5.469

10.  Donor-acceptor distance distributions in a double-labeled fluorescent oligonucleotide both as a single strand and in duplexes.

Authors:  K M Parkhurst; L J Parkhurst
Journal:  Biochemistry       Date:  1995-01-10       Impact factor: 3.162

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  12 in total

1.  The dynamics of structural deformations of immobilized single light-harvesting complexes.

Authors:  M A Bopp; A Sytnik; T D Howard; R J Cogdell; R M Hochstrasser
Journal:  Proc Natl Acad Sci U S A       Date:  1999-09-28       Impact factor: 11.205

2.  Dynamics and folding of single two-stranded coiled-coil peptides studied by fluorescent energy transfer confocal microscopy.

Authors:  D S Talaga; W L Lau; H Roder; J Tang; Y Jia; W F DeGrado; R M Hochstrasser
Journal:  Proc Natl Acad Sci U S A       Date:  2000-11-21       Impact factor: 11.205

3.  Information bounds and optimal analysis of dynamic single molecule measurements.

Authors:  Lucas P Watkins; Haw Yang
Journal:  Biophys J       Date:  2004-06       Impact factor: 4.033

4.  High count rates with total internal reflection fluorescence correlation spectroscopy.

Authors:  Kai Hassler; Tiemo Anhut; Rudolf Rigler; Michael Gösch; Theo Lasser
Journal:  Biophys J       Date:  2004-11-05       Impact factor: 4.033

5.  Functional conformational motions in the turnover cycle of cholesterol oxidase.

Authors:  Hans-Philipp Lerch; Rudolf Rigler; Alexander S Mikhailov
Journal:  Proc Natl Acad Sci U S A       Date:  2005-07-26       Impact factor: 11.205

6.  Fluorescence and photobleaching dynamics of single light-harvesting complexes.

Authors:  M A Bopp; Y Jia; L Li; R J Cogdell; R M Hochstrasser
Journal:  Proc Natl Acad Sci U S A       Date:  1997-09-30       Impact factor: 11.205

Review 7.  Single-molecule Förster resonance energy transfer studies of RNA structure, dynamics and function.

Authors:  Mark Helm; Andrei Yu Kobitski; G Ulrich Nienhaus
Journal:  Biophys Rev       Date:  2009-11-10

8.  Monitoring conformational dynamics of a single molecule by selective fluorescence spectroscopy.

Authors:  C Eggeling; J R Fries; L Brand; R Günther; C A Seidel
Journal:  Proc Natl Acad Sci U S A       Date:  1998-02-17       Impact factor: 11.205

9.  Single-molecule imaging and spectroscopy using fluorescence and surface-enhanced Raman scattering.

Authors:  M Ishikawa; Y Maruyama; J-Y Ye; M Futamata
Journal:  J Biol Phys       Date:  2002-12       Impact factor: 1.365

10.  Free Brownian motion of individual lipid molecules in biomembranes.

Authors:  A Sonnleitner; G J Schütz; T Schmidt
Journal:  Biophys J       Date:  1999-11       Impact factor: 4.033

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