Literature DB >> 9220982

Fluoride binding in hemoproteins: the importance of the distal cavity structure.

F Neri1, D Kok, M A Miller, G Smulevich.   

Abstract

The electronic absorption and resonance Raman spectra of the fluoride complexes of various peroxidases and selected site-directed mutants have been studied at pH 5.0, and compared to the spectra obtained for the myoglobin-F adduct. It is shown that the electronic absorption maxima depend on the degree of conjugation between the porphyrin macrocycle and the vinyl substituents. Moreover, it is confirmed that the wavelength of the CT1 band is a sensitive probe of axial ligand polarity and of its interaction with the distal protein residues. The results highlight the different mechanism of stabilization of the fluoride ligand exerted by the distal residues in myoglobin and peroxidases. In peroxidases, the Arg is determinant in controlling the ligand binding via a strong hydrogen bond between the positively charged guanidinium group and the anion. Mutation of Arg to Leu decreases the stability of the complex by 900-fold, suggesting that this interaction stabilizes the complex by 4 kcal/mol. The distal His also contributes to the stability of the fluoride complex, presumably by accepting a proton from HF and hydrogen-bonding, through a water molecule, to the anion. Mutation of His to Leu decreases the stability of the fluoride complex by 30-fold, suggesting that this interaction is much weaker than the interaction with the distal Arg. For Mb, the distal His is solely responsible for stabilization of the exogenous ligand.

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Year:  1997        PMID: 9220982     DOI: 10.1021/bi970248+

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  11 in total

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Journal:  J Biol Inorg Chem       Date:  2000-06       Impact factor: 3.358

4.  Single-site mutations on the catalase-peroxidase from Sinorhizobium meliloti: role of the distal Gly and the three amino acids of the putative intrinsic cofactor.

Authors:  Silvia Ardissone; Enzo Laurenti; Pierre Frendo; Elena M Ghibaudi; Alain Puppo
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5.  Haem-linked interactions in horseradish peroxidase revealed by spectroscopic analysis of the Phe-221-->Met mutant.

Authors:  B D Howes; N C Veitch; A T Smith; C G White; G Smulevich
Journal:  Biochem J       Date:  2001-01-15       Impact factor: 3.857

6.  Spectroscopic characterization of mutations at the Phe41 position in the distal haem pocket of horseradish peroxidase C: structural and functional consequences.

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Journal:  Biochem J       Date:  2002-05-01       Impact factor: 3.857

7.  Fluoride binding to characteristic heme-pocket centers: Insights into ligand stability.

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Journal:  J Inorg Biochem       Date:  2021-08-17       Impact factor: 4.155

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9.  Regulating the coordination state of a heme protein by a designed distal hydrogen-bonding network.

Authors:  Jun-Fang Du; Wei Li; Lianzhi Li; Ge-Bo Wen; Ying-Wu Lin; Xiangshi Tan
Journal:  ChemistryOpen       Date:  2014-12-01       Impact factor: 2.911

10.  Aminoalcohol-Induced Activation of Organophosphorus Hydrolase (OPH) towards Diisopropylfluorophosphate (DFP).

Authors:  Dandan Li; Yunze Zhang; Haitao Song; Liangqiu Lu; Deli Liu; Yongze Yuan
Journal:  PLoS One       Date:  2017-01-13       Impact factor: 3.240

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