Literature DB >> 15340169

Structure and function of the Gondwanian hemoglobin of Pseudaphritis urvillii, a primitive notothenioid fish of temperate latitudes.

Cinzia Verde1, Barry D Howes, M Cristina De Rosa, Luca Raiola, Giulietta Smulevich, Richard Williams, Bruno Giardina, Elio Parisi, Guido Di Prisco.   

Abstract

The suborder Notothenioidei dominates the Antarctic ichthyofauna. The non-Antarctic monotypic family Pseudaphritidae is one of the most primitive families. The characterization of the oxygen-transport system of euryhaline Pseudaphritis urvillii is herewith reported. Similar to most Antarctic notothenioids, this temperate species has a single major hemoglobin (Hb 1, over 95% of the total). Hb 1 has strong Bohr and Root effects. It shows two very uncommon features in oxygen binding: At high pH values, the oxygen affinity is exceptionally high compared to other notothenioids, and subunit cooperativity is modulated by pH in an unusual way, namely the curve of the Hill coefficient is bell-shaped, with values approaching 1 at both extremes of pH. Molecular modeling, electronic absorption and resonance Raman spectra have been used to characterize the heme environment of Hb 1 in an attempt to explain these features, particularly in view of some potentially important nonconservative replacements found in the primary structure. Compared to human HbA, no major changes were found in the structure of the proximal cavity of the alpha-chain of Hb 1, although an altered distal histidyl and heme position was identified in the models of the beta-chain, possibly facilitated by a more open heme pocket due to reduced steric constraints on the vinyl substituent groups. This conformation may lead to the hemichrome form identified by spectroscopy in the Met state, which likely fulfils a potentially important physiological role.

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Year:  2004        PMID: 15340169      PMCID: PMC2286566          DOI: 10.1110/ps.04861504

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  42 in total

1.  Resonance Raman spectra of heme proteins. Effects of oxidation and spin state.

Authors:  T G Spiro; T C Strekas
Journal:  J Am Chem Soc       Date:  1974-01-23       Impact factor: 15.419

2.  Influence of globin structure on the state of the heme. 3. Changes in heme spectra accompanying allosteric transitions in methemoglobin and their implications for heme-heme interaction.

Authors:  M F Perutz; E J Heidner; J E Ladner; J G Beetlestone; C Ho; E F Slade
Journal:  Biochemistry       Date:  1974-05-07       Impact factor: 3.162

3.  Influence of globin structure on the state of the heme. I. Human deoxyhemoglobin.

Authors:  M F Perutz; J E Ladner; S R Simon; C Ho
Journal:  Biochemistry       Date:  1974-05-07       Impact factor: 3.162

4.  Dynamics of ligand binding to heme proteins.

Authors:  D A Case; M Karplus
Journal:  J Mol Biol       Date:  1979-08-15       Impact factor: 5.469

5.  Quaternary structures and low frequency molecular vibrations of haems of deoxy and oxyhaemoglobin studied by resonance raman scattering.

Authors:  K Nagai; T Kitagawa; H Morimoto
Journal:  J Mol Biol       Date:  1980-01-25       Impact factor: 5.469

6.  Stereochemistry of cooperative effects in fish an amphibian haemoglobins.

Authors:  M F Perutz; M Brunori
Journal:  Nature       Date:  1982-09-30       Impact factor: 49.962

7.  From the Arctic to fetal life: physiological importance and structural basis of an 'additional' chloride-binding site in haemoglobin.

Authors:  M Cristina De Rosa; Massimo Castagnola; Claudia Bertonati; Antonio Galtieri; Bruno Giardina
Journal:  Biochem J       Date:  2004-06-15       Impact factor: 3.857

8.  Structure of human oxyhaemoglobin at 2.1 A resolution.

Authors:  B Shaanan
Journal:  J Mol Biol       Date:  1983-11-25       Impact factor: 5.469

9.  The oxidation process of Antarctic fish hemoglobins.

Authors:  Luigi Vitagliano; Giovanna Bonomi; Antonio Riccio; Guido di Prisco; Giulietta Smulevich; Lelio Mazzarella
Journal:  Eur J Biochem       Date:  2004-05

10.  Resonance Raman investigation of carbon monoxide bonding in (carbon monoxy)hemoglobin and -myoglobin: detection of Fe-CO stretching and Fe-C-O bending vibrations and influence of the quaternary structure change.

Authors:  M Tsubaki; R B Srivastava; N T Yu
Journal:  Biochemistry       Date:  1982-03-16       Impact factor: 3.162

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  3 in total

1.  Denaturation and intermediates study of two sturgeon hemoglobins by n-dodecyl trimethylammonium bromide.

Authors:  Shohreh Ariaeenejad; Mehran Habibi-Rezaei; Kaveh Kavousi; Shahla Jamili; Mohammad Reza Fatemi; Jun Hong; Najmeh Poursasan; Nader Sheibani; Ali A Moosavi-Movahedi
Journal:  Int J Biol Macromol       Date:  2012-11-09       Impact factor: 6.953

2.  An order-disorder transition plays a role in switching off the root effect in fish hemoglobins.

Authors:  Alessandro Vergara; Luigi Vitagliano; Antonello Merlino; Filomena Sica; Katia Marino; Cinzia Verde; Guido di Prisco; Lelio Mazzarella
Journal:  J Biol Chem       Date:  2010-07-07       Impact factor: 5.157

3.  Biophysical characterisation of neuroglobin of the icefish, a natural knockout for hemoglobin and myoglobin. Comparison with human neuroglobin.

Authors:  Daniela Giordano; Ignacio Boron; Stefania Abbruzzetti; Wendy Van Leuven; Francesco P Nicoletti; Flavio Forti; Stefano Bruno; C-H Christina Cheng; Luc Moens; Guido di Prisco; Alejandro D Nadra; Darío Estrin; Giulietta Smulevich; Sylvia Dewilde; Cristiano Viappiani; Cinzia Verde
Journal:  PLoS One       Date:  2012-12-03       Impact factor: 3.240

  3 in total

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