Literature DB >> 9204279

Population statistics of protein structures: lessons from structural classifications.

S E Brenner1, C Chothia, T J Hubbard.   

Abstract

Structural classifications aid the interpretation of proteins by describing degrees of structural and evolutionary relatedness. They have also recently revealed strikingly skewed distributions at all levels; for example, a small number of folds are far more common than others, and just a few superfamilies are known to have diverged widely. The classifications also provide an indication of the total number of superfamilies in nature.

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Year:  1997        PMID： 9204279     DOI： 10.1016/s0959-440x(97)80054-1

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN： 0959-440X            Impact factor:   6.809


  37 in total

1.  The ASTRAL compendium for protein structure and sequence analysis.

Authors:  S E Brenner; P Koehl; M Levitt
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  Diversity of functions of proteins with internal symmetry in spatial arrangement of secondary structural elements.

Authors:  K Kinoshita; A Kidera; N Go
Journal:  Protein Sci       Date:  1999-06       Impact factor: 6.725

3.  Expectations from structural genomics.

Authors:  S E Brenner; M Levitt
Journal:  Protein Sci       Date:  2000-01       Impact factor: 6.725

4.  Mechanics and dynamics of B1 domain of protein G: role of packing and surface hydrophobic residues.

Authors:  M A Ceruso; A Amadei; A Di Nola
Journal:  Protein Sci       Date:  1999-01       Impact factor: 6.725

5.  Protein topology and stability define the space of allowed sequences.

Authors:  Patrice Koehl; Michael Levitt
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-22       Impact factor: 11.205

Review 6.  Structural genomics: a pipeline for providing structures for the biologist.

Authors:  Mark R Chance; Anne R Bresnick; Stephen K Burley; Jian-Sheng Jiang; Christopher D Lima; Andrej Sali; Steven C Almo; Jeffrey B Bonanno; John A Buglino; Simon Boulton; Hua Chen; Narayanan Eswar; Guoshun He; Raymond Huang; Valentin Ilyin; Linda McMahan; Ursula Pieper; Soumya Ray; Marc Vidal; Li Kai Wang
Journal:  Protein Sci       Date:  2002-04       Impact factor: 6.725

7.  Thoroughly sampling sequence space: large-scale protein design of structural ensembles.

Authors:  Stefan M Larson; Jeremy L England; John R Desjarlais; Vijay S Pande
Journal:  Protein Sci       Date:  2002-12       Impact factor: 6.725

8.  Identification of protein functions from a molecular surface database, eF-site.

Authors:  Kengo Kinoshita; Jun'ichi Furui; Haruki Nakamura
Journal:  J Struct Funct Genomics       Date:  2002

9.  Designability of alpha-helical proteins.

Authors:  Eldon G Emberly; Ned S Wingreen; Chao Tang
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-12       Impact factor: 11.205

Review 10.  Protein folds and protein folding.

Authors:  R Dustin Schaeffer; Valerie Daggett
Journal:  Protein Eng Des Sel       Date:  2010-11-03       Impact factor: 1.650
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