Literature DB >> 9201996

Discovery of the shortest sequence motif for high level mucin-type O-glycosylation.

A Yoshida1, M Suzuki, H Ikenaga, M Takeuchi.   

Abstract

The consensus primary amino acid sequence for mucin-type O-glycosylation sites has not been identified. To determine the shortest motif sequence required for high level mucin-type O-glycosylation, we prepared more than 100 synthetic peptides and assayed in vitro O-GalNAc transfer to serine or threonine in these peptides using a bovine colostrum UDP-N-acetylgalactosamine:polypeptide N-acetylgalactosaminyl transferase (O-GalNAcT). We chose the sequence PDAASAAP from human erythropoietin (hEPO) for further systematic substitutions because it accepted GalNAc and was a fairly simple sequence consisting only of four kinds of amino acids. Several substitutions showed that threonine is approximately 40-fold better than serine as the glycosylated amino acid and a proline at position +3 on the C-terminal side is very important. To define the effect of proline residues around the glycosylation site, we analyzed a series of peptides containing one to three proline residues in a parent peptide AAATAAA. The results clearly indicated that prolines at positions +1 and +3 had a positive effect. The O-GalNAc transfer level of AAATPAP was increased approximately 90-fold from AAATAAA. The deletion of amino acids from the N-terminal side of the glycosylation site suggested that five amino acids from position -1 to +3 were especially important for glycosylation. Moreover, the influence of all 20 amino acids at positions -1, +2, and +4 was analyzed. Uncharged amino acids were preferred at position -1, and small or positively charged amino acids were preferred at position +2. No preference was observed at position +4. We propose a mucin-type O-glycosylation motif, XTPXP, which may be suitable as a signal for protein O-glycosylation. The features observed in this study also appear to be very useful for prediction of mucin-type O-glycosylation sites in glycoproteins.

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Year:  1997        PMID: 9201996     DOI: 10.1074/jbc.272.27.16884

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  24 in total

1.  Support vector machine-based mucin-type o-linked glycosylation site prediction using enhanced sequence feature encoding.

Authors:  Manabu Torii; Hongfang Liu; Zhang-Zhi Hu
Journal:  AMIA Annu Symp Proc       Date:  2009-11-14

2.  Neuronal hypoxia induces Hsp40-mediated nuclear import of type 3 deiodinase as an adaptive mechanism to reduce cellular metabolism.

Authors:  Sungro Jo; Imre Kalló; Zsuzsanna Bardóczi; Rafael Arrojo e Drigo; Anikó Zeöld; Zsolt Liposits; Anthony Oliva; Vance P Lemmon; John L Bixby; Balázs Gereben; Antonio C Bianco
Journal:  J Neurosci       Date:  2012-06-20       Impact factor: 6.167

Review 3.  Pathobiological implications of mucin glycans in cancer: Sweet poison and novel targets.

Authors:  Seema Chugh; Vinayaga S Gnanapragassam; Maneesh Jain; Satyanarayana Rachagani; Moorthy P Ponnusamy; Surinder K Batra
Journal:  Biochim Biophys Acta       Date:  2015-08-28

4.  Activity Detection of GalNAc Transferases by Protein-Based Fluorescence Sensors In Vivo.

Authors:  Lina Song; Collin Bachert; Adam D Linstedt
Journal:  Methods Mol Biol       Date:  2016

5.  O-GLYCBASE Version 3.0: a revised database of O-glycosylated proteins.

Authors:  J E Hansen; O Lund; J Nilsson; K Rapacki; S Brunak
Journal:  Nucleic Acids Res       Date:  1998-01-01       Impact factor: 16.971

6.  Database analysis of O-glycosylation sites in proteins.

Authors:  T H Thanka Christlet; K Veluraja
Journal:  Biophys J       Date:  2001-02       Impact factor: 4.033

7.  A novel model to predict O-glycosylation sites using a highly unbalanced dataset.

Authors:  Kun Zhou; Chunzhi Ai; Peipei Dong; Xuran Fan; Ling Yang
Journal:  Glycoconj J       Date:  2012-08-03       Impact factor: 2.916

8.  Order and maximum incorporation of N-acetyl-D-galactosamine into threonine residues of MUC2 core peptide with microsome fraction of human-colon-carcinoma LS174T cells.

Authors:  S Iida; H Takeuchi; K Kato; K Yamamoto; T Irimura
Journal:  Biochem J       Date:  2000-04-15       Impact factor: 3.857

Review 9.  The acceptor specificity of UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferases.

Authors:  A P Elhammer; F J Kézdy; A Kurosaka
Journal:  Glycoconj J       Date:  1999-02       Impact factor: 2.916

10.  Structural features of the human salivary mucin, MUC7.

Authors:  T L Gururaja; N Ramasubbu; P Venugopalan; M S Reddy; K Ramalingam; M J Levine
Journal:  Glycoconj J       Date:  1998-05       Impact factor: 2.916

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