Literature DB >> 9199756

Computer program to predict likelihood of finding and HLA-matched donor: methodology, validation, and application.

M Mori1, M Graves, E L Milford, P G Beatty.   

Abstract

Approximately 65% of the patients requiring bone marrow transplantation do not have an HLA-A, -B, -DR identical sibling and therefore need to find a phenotypically matched unrelated donor. As of June 30, 1996, the National Marrow Donor Program maintains a registry of 2.31 million volunteer donors, 35% of whom are fully typed for HLA-A, -B, -DR loci. Because a majority of the donors has not been DR typed, a patient who does not find a complete match at the time of the preliminary search may elect to prospectively DR type A, B matched and A, B one-antigen mismatched donors. An efficient strategy is therefore needed for determining the likelihood that an appropriate donor exists and for deciding which of the donors that have not yet been DR typed should be tested for DR matching with the candidate. We developed a mathematical algorithm and computer program to facilitate the search for a suitable donor by donor race and phenotype. The program provides information on the likelihood of 1) finding at least one HLA-A, -B, -DR phenotypically matched donor, 2) the likelihood of finding at least one DR match among m A, B matched donors who have not yet been DR typed, and 3) the likelihood of an A, B one antigen mismatched donor of a specific phenotype being a DR match with the patient. The mathematical models underlying the program are based on basic population genetics theory and utilize HLA-A, -B, DR haplotype frequencies derived from the NMDP registry. The results of the validation study show that the prediction is highly accurate at the level of broad antigens. The algorithm and program have the potential to assist patients and physicians in optimizing their decisions regarding clinical management and resource allocation on the process of searching for a suitable unrelated bone marrow donor.

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Year:  1996        PMID: 9199756

Source DB:  PubMed          Journal:  Biol Blood Marrow Transplant        ISSN: 1083-8791            Impact factor:   5.742


  5 in total

1.  One-antigen mismatched related versus HLA-matched unrelated donor hematopoietic stem cell transplantation in adults with acute leukemia: Center for International Blood and Marrow Transplant Research results in the era of molecular HLA typing.

Authors:  David Valcárcel; Jorge Sierra; Tao Wang; Fangyu Kan; Vikas Gupta; Gregory A Hale; David I Marks; Philip L McCarthy; Machteld Oudshoorn; Effie W Petersdorf; Olle Ringdén; Michelle Setterholm; Stephen R Spellman; Edmund K Waller; James L Gajewski; Susana R Marino; David Senitzer; Stephanie J Lee
Journal:  Biol Blood Marrow Transplant       Date:  2010-07-30       Impact factor: 5.742

2.  The increase of the global donor inventory is of limited benefit to patients of non-Northwestern European descent.

Authors:  Suzanna M van Walraven; Anneke Brand; Jack N A Bakker; Martin B A Heemskerk; Suzan Nillesen; Marc B Bierings; Laura B Bungener; Bouke G Hepkema; Arjan Lankester; Arnold van der Meer; Kees Sintnicolaas; Judith A E Somers; Eric Spierings; Marcel G J Tilanus; Christien E M Voorter; Jan J Cornelissen; Machteld Oudshoorn
Journal:  Haematologica       Date:  2016-08-25       Impact factor: 9.941

3.  HLA match likelihoods for hematopoietic stem-cell grafts in the U.S. registry.

Authors:  Loren Gragert; Mary Eapen; Eric Williams; John Freeman; Stephen Spellman; Robert Baitty; Robert Hartzman; J Douglas Rizzo; Mary Horowitz; Dennis Confer; Martin Maiers
Journal:  N Engl J Med       Date:  2014-07-24       Impact factor: 91.245

4.  Impact of allele-level HLA matching on outcomes after myeloablative single unit umbilical cord blood transplantation for hematologic malignancy.

Authors:  Mary Eapen; John P Klein; Annalisa Ruggeri; Stephen Spellman; Stephanie J Lee; Claudio Anasetti; William Arcese; Juliet N Barker; Lee Ann Baxter-Lowe; Maria Brown; Marcelo A Fernandez-Vina; John Freeman; Wensheng He; Anna Paola Iori; Mary M Horowitz; Franco Locatelli; Susana Marino; Martin Maiers; Gerard Michel; Guillermo F Sanz; Eliane Gluckman; Vanderson Rocha
Journal:  Blood       Date:  2013-10-18       Impact factor: 22.113

5.  Revisit of Optimal Donor Number Estimation in the Hong Kong Bone Marrow Donor Registry.

Authors:  Jenny Chung Yee Ho; Stephen Kwok Fan Cheung; Zhongyi Lui; Ivan Wing Hong Tang; Wanling Yang; Patrick Ip; Cheuk Kwong Lee; Derek Middleton; Janette Siu Yin Kwok
Journal:  Front Immunol       Date:  2021-04-16       Impact factor: 7.561

  5 in total

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