| Literature DB >> 33936051 |
Jenny Chung Yee Ho1, Stephen Kwok Fan Cheung1, Zhongyi Lui2, Ivan Wing Hong Tang1, Wanling Yang2, Patrick Ip2, Cheuk Kwong Lee3, Derek Middleton4, Janette Siu Yin Kwok1.
Abstract
High resolution typing of the HLA-DPB1 locus for patient who requested for hematopoietic stem cell transplantation (HSCT) workup has recently become mandatory by the National Marrow Donor Program (NMDP) in order to facilitate matching between donors and recipients for better outcomes. The likelihood of identifying HLA matched donors in Hong Kong, on top of the existing HLA-A, -B, -C, and -DRB1 loci, is revisited in this study. HLA-A, -B, -C, -DRB1 and -DPB1 genotypes of 5,266 volunteer unrelated Chinese donors from the Hong Kong Bone Marrow Donor Registry (HKBMDR), were included in this study. Matching models were employed to determine the matching probabilities for 10/10(DPB1) and 9/10(DPB1) HLA match. The matching probabilities are 20% at 10/10(DPB1) HLA match and 55% at 9/10(DPB1) match, based on the existing 130,000 donors in the HKBMDR. The likelihoods of match become 27% and 65% respectively, by increasing the registry to 250,000. However, if DPB T-cell-epitope (TCE) model is considered in the matching, the probability will increase to 46% at 10/10 DPB1 permissive mismatching. Our findings provide vital information about the future planning on the targeted recruitment size, HLA typing and search strategies of the donor registry and arose the transplant physicians' acceptability to 9/10(DBP1) or 10/10(DBP1) HLA match. Nevertheless, the marrow donor registry has planned for increasing the registry size and bringing down the age of recruited donors which will ultimately enhance patient outcome.Entities:
Keywords: Chinese; HLA antigens; alleles; frequency haplotypes; matching probability
Year: 2021 PMID: 33936051 PMCID: PMC8085527 DOI: 10.3389/fimmu.2021.638253
Source DB: PubMed Journal: Front Immunol ISSN: 1664-3224 Impact factor: 7.561
Characteristics of the haplotypes of Hong Kong.
| HLA loci available | A-C-B-DRB1-DPB1 | |
|---|---|---|
| Sample size (N) | 5,266 | |
| Sample size (2N) | 10,532 | |
| Number of haplotypes (>0.006%) | 3,326 | |
| Sum (%) of haplotype frequencies within the top | 10 | 10.7 |
| 25 | 16.0 | |
| 50 | 21.1 | |
| 100 | 28.1 | |
| 250 | 40.2 | |
| 500 | 51.7 | |
| 1,000 | 65.6 | |
| Number of haplotypes with frequency | ≥0.01 | 3 |
| ≥0.005 | 9 | |
| ≥0.001 | 126 | |
| ≥0.0005 | 323 | |
| ≥0.0001 | 1,918 |
Figure 1Matching Probability (MP) of varies level of HLA match against different donor registry size in HKBMDR. DPB1 PMM – with HLA-DPB1 permissive mismatch.