Literature DB >> 9188731

Loss of translational entropy in binding, folding, and catalysis.

L M Amzel1.   

Abstract

There is a loss of translational entropy associated with the formation of a complex between two molecules in solution. Estimation of this contribution is essential for understanding binding, protein-protein association, and catalysis. Based on the cell model of liquids, it is possible to estimate the loss of translational entropy in all these cases. The resulting formulas are straightforward, and the calculations are easy to perform. Comparison of the results with experimental data suggests that the proposed method provides estimates that are much more accurate than those obtained with existing methods.

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Year:  1997        PMID: 9188731

Source DB:  PubMed          Journal:  Proteins        ISSN: 0887-3585


  27 in total

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10.  Effect of explicit water molecules on ligand-binding affinities calculated with the MM/GBSA approach.

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