Literature DB >> 9184137

Resonance Raman examination of the wavelength regulation mechanism in human visual pigments.

G G Kochendoerfer1, Z Wang, D D Oprian, R A Mathies.   

Abstract

Resonance Raman spectra of recombinant human green and red cone pigments have been obtained to examine the molecular mechanism of color recognition by visual pigments. Spectra were acquired using a 77 K resonance Raman microprobe or preresonance Raman spectroscopy. The vibrational bands were assigned by comparison to the spectra of bovine rhodopsin and model compounds. The C=NH stretching frequencies of rhodopsin, the green cone pigment, and the red cone pigment in H2O (D2O) are found at 1656 (1623), 1640 (1618), and 1644 cm(-1), respectively. Together with previous resonance Raman studies on iodopsin [Lin, S. W., Imamoto, Y., Fukada, Y., Shichida, Y., Yoshizawa, T., & Mathies, R. A. (1994) Biochemistry 33, 2151-2160], these values suggest that red and green pigments have very similar Schiff base environments, while the Schiff base group in rhodopsin is more strongly hydrogen-bonded to its protein environment. The absence of significant frequency and intensity differences of modes in the fingerprint and the hydrogen out-of-plane wagging regions for all these pigments does not support the hypothesis that local chromophore interactions with charged protein residues and/or chromophore planarization are crucial for the absorption differences among these pigments. However, our data are consistent with the idea that the Schiff base group in blue visual pigments is stabilized by protein and water dipoles and that the removal of this dipolar field shifts the absorption maximum from blue to green. A further red shift of the lambda(max) from the green to the red pigment is successfully modeled by the addition of hydroxyl-bearing amino acids (Ser164, Tyr261, and Thr269) close to the ionone ring that lower the transition energy by interacting with the change of dipole moment of the chromophore upon excitation. The increased hydrogen bonding of the protonated Schiff base group in rhodopsin is predicted to account for the 30 nm blue shift of its absorption maximum compared to that of the green pigment.

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Year:  1997        PMID: 9184137     DOI: 10.1021/bi970322o

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  17 in total

1.  Spectral tuning in salamander visual pigments studied with dihydroretinal chromophores.

Authors:  C L Makino; M Groesbeek; J Lugtenburg; D A Baylor
Journal:  Biophys J       Date:  1999-08       Impact factor: 4.033

2.  Color vision: "OH-site" rule for seeing red and green.

Authors:  Sivakumar Sekharan; Kota Katayama; Hideki Kandori; Keiji Morokuma
Journal:  J Am Chem Soc       Date:  2012-06-18       Impact factor: 15.419

3.  Evolutionary analysis of rhodopsin and cone pigments: connecting the three-dimensional structure with spectral tuning and signal transfer.

Authors:  David C Teller; Ronald E Stenkamp; Krzysztof Palczewski
Journal:  FEBS Lett       Date:  2003-11-27       Impact factor: 4.124

4.  Resonance Raman Structural Evidence that the Cis-to-Trans Isomerization in Rhodopsin Occurs in Femtoseconds.

Authors:  J E Kim; D W McCamant; L Zhu; R A Mathies
Journal:  J Phys Chem B       Date:  2001-02-15       Impact factor: 2.991

Review 5.  Microbial and animal rhodopsins: structures, functions, and molecular mechanisms.

Authors:  Oliver P Ernst; David T Lodowski; Marcus Elstner; Peter Hegemann; Leonid S Brown; Hideki Kandori
Journal:  Chem Rev       Date:  2013-12-23       Impact factor: 60.622

6.  Function of extracellular loop 2 in rhodopsin: glutamic acid 181 modulates stability and absorption wavelength of metarhodopsin II.

Authors:  Elsa C Y Yan; Manija A Kazmi; Soma De; Belinda S W Chang; Christoph Seibert; Ethan P Marin; Richard A Mathies; Thomas P Sakmar
Journal:  Biochemistry       Date:  2002-03-19       Impact factor: 3.162

7.  Increasing the Stability of Recombinant Human Green Cone Pigment.

Authors:  Timothy S Owen; David Salom; Wenyu Sun; Krzysztof Palczewski
Journal:  Biochemistry       Date:  2018-01-29       Impact factor: 3.162

8.  Quantum mechanical/molecular mechanical structure, enantioselectivity, and spectroscopy of hydroxyretinals and insights into the evolution of color vision in small white butterflies.

Authors:  Sivakumar Sekharan; Shozo Yokoyama; Keiji Morokuma
Journal:  J Phys Chem B       Date:  2011-12-06       Impact factor: 2.991

9.  Chromophore structure in lumirhodopsin and metarhodopsin I by time-resolved resonance Raman microchip spectroscopy.

Authors:  D Pan; R A Mathies
Journal:  Biochemistry       Date:  2001-07-03       Impact factor: 3.162

10.  Spectral tuning in visual pigments: an ONIOM(QM:MM) study on bovine rhodopsin and its mutants.

Authors:  Ahmet Altun; Shozo Yokoyama; Keiji Morokuma
Journal:  J Phys Chem B       Date:  2008-05-13       Impact factor: 2.991

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