Literature DB >> 9162504

DNA-protein interactions: IHF--the master bender.

A Travers1.   

Abstract

The crystal structure of Escherichia coli integration host factor complexed with DNA reveals how the sequence-specificity of DNA binding can be determined almost entirely by the structural features of the DNA itself and not by direct readout of the base sequence. There are lessons to be drawn for other DNA-binding motifs.

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Year:  1997        PMID： 9162504     DOI： 10.1016/s0960-9822(06)00114-x

Source DB:  PubMed          Journal:  Curr Biol        ISSN： 0960-9822            Impact factor:   10.834


  16 in total

Review 1.  Single-molecule approaches to probe the structure, kinetics, and thermodynamics of nucleoprotein complexes that regulate transcription.

Authors:  Laura Finzi; David D Dunlap
Journal:  J Biol Chem       Date:  2010-04-09       Impact factor: 5.157

2.  Molecular beacon-equilibrium cyclization detection of DNA-protein complexes.

Authors:  Jason Vitko; Iulian Rujan; Lagu Androga; Ishita Mukerji; Philip H Bolton
Journal:  Biophys J       Date:  2007-07-13       Impact factor: 4.033

Review 3.  DNA topology and adaptation of Salmonella typhimurium to an intracellular environment.

Authors:  D G Marshall; F Bowe; C Hale; G Dougan; C J Dorman
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2000-05-29       Impact factor: 6.237

Review 4.  The λ Integrase Site-specific Recombination Pathway.

Authors:  Arthur Landy
Journal:  Microbiol Spectr       Date:  2015-04

Review 5.  Building a bacterial orisome: emergence of new regulatory features for replication origin unwinding.

Authors:  Alan C Leonard; Julia E Grimwade
Journal:  Mol Microbiol       Date:  2005-02       Impact factor: 3.501

6.  Local genomic features predict the distinct and overlapping binding patterns of the bHLH-Zip family oncoproteins MITF and MYC-MAX.

Authors:  Miroslav Hejna; Wooyoung M Moon; Jeffrey Cheng; Akinori Kawakami; David E Fisher; Jun S Song
Journal:  Pigment Cell Melanoma Res       Date:  2018-12-21       Impact factor: 4.693

7.  Activation of site-specific DNA integration in human cells by a single chain integration host factor.

Authors:  Teresa Corona; Qiuye Bao; Nicole Christ; Thomas Schwartz; Jinming Li; Peter Dröge
Journal:  Nucleic Acids Res       Date:  2003-09-01       Impact factor: 16.971

8.  A flexible integrative approach based on random forest improves prediction of transcription factor binding sites.

Authors:  Bart Hooghe; Stefan Broos; Frans van Roy; Pieter De Bleser
Journal:  Nucleic Acids Res       Date:  2012-04-05       Impact factor: 16.971

9.  IHF-binding sites inhibit DNA loop formation and transcription initiation.

Authors:  Yi-Xin Huo; Yuan-Tao Zhang; Yan Xiao; Xiaodong Zhang; Martin Buck; Annie Kolb; Yi-Ping Wang
Journal:  Nucleic Acids Res       Date:  2009-04-24       Impact factor: 16.971

Review 10.  Composition of Transcription Machinery and Its Crosstalk with Nucleoid-Associated Proteins and Global Transcription Factors.

Authors:  Georgi Muskhelishvili; Patrick Sobetzko; Sanja Mehandziska; Andrew Travers
Journal:  Biomolecules       Date:  2021-06-22
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