Literature DB >> 15686547

Building a bacterial orisome: emergence of new regulatory features for replication origin unwinding.

Alan C Leonard1, Julia E Grimwade.   

Abstract

Triggering new rounds of chromosomal DNA replication during the bacterial cell cycle is exquisitely regulated, ensuring both proper timing and one round per cycle stringency. A critical first step is stable unwinding of oriC, the chromosomal replication origin, by multiprotein orisome complexes comprising the AAA+ initiator DnaA and modulator proteins that bend DNA. Recently identified oriC-DnaA interactions in Escherichia coli raise important questions regarding the molecular mechanisms that regulate origin unwinding in bacteria. We describe staged binding of E. coli origin recognition proteins and suggest an unwinding switch based on interactions between DnaA-ATP and specialized oriC sites that must be filled during orisome assembly. By focusing multiple regulatory pathways on only a few key oriC DNA-protein interactions, this model includes an efficient way to control unwinding followed by orisome inactivation during the cell cycle. Future studies will determine whether this regulatory scheme is correct and whether it is generally applicable to other bacterial types.

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Year:  2005        PMID: 15686547      PMCID: PMC1400601          DOI: 10.1111/j.1365-2958.2004.04467.x

Source DB:  PubMed          Journal:  Mol Microbiol        ISSN: 0950-382X            Impact factor:   3.501


  58 in total

1.  A novel DnaA protein-binding site at 94.7 min on the Escherichia coli chromosome.

Authors:  R Kitagawa; H Mitsuki; T Okazaki; T Ogawa
Journal:  Mol Microbiol       Date:  1996-03       Impact factor: 3.501

2.  Ordered and sequential binding of DnaA protein to oriC, the chromosomal origin of Escherichia coli.

Authors:  C Margulies; J M Kaguni
Journal:  J Biol Chem       Date:  1996-07-19       Impact factor: 5.157

3.  E. coli SeqA protein binds oriC in two different methyl-modulated reactions appropriate to its roles in DNA replication initiation and origin sequestration.

Authors:  S Slater; S Wold; M Lu; E Boye; K Skarstad; N Kleckner
Journal:  Cell       Date:  1995-09-22       Impact factor: 41.582

4.  Functions of histone-like proteins in the initiation of DNA replication at oriC of Escherichia coli.

Authors:  A Roth; B Urmoneit; W Messer
Journal:  Biochimie       Date:  1994       Impact factor: 4.079

5.  Fis cannot support oriC DNA replication in vitro.

Authors:  H Hiasa; K J Marians
Journal:  J Biol Chem       Date:  1994-10-07       Impact factor: 5.157

6.  The DnaA box R4 in the minimal oriC is dispensable for initiation of Escherichia coli chromosome replication.

Authors:  D B Bates; T Asai; Y Cao; M W Chambers; G W Cadwell; E Boye; T Kogoma
Journal:  Nucleic Acids Res       Date:  1995-08-25       Impact factor: 16.971

Review 7.  The initiator protein DnaA: evolution, properties and function.

Authors:  K Skarstad; E Boye
Journal:  Biochim Biophys Acta       Date:  1994-03-01

8.  SeqA: a negative modulator of replication initiation in E. coli.

Authors:  M Lu; J L Campbell; E Boye; N Kleckner
Journal:  Cell       Date:  1994-05-06       Impact factor: 41.582

9.  SeqA limits DnaA activity in replication from oriC in Escherichia coli.

Authors:  U von Freiesleben; K V Rasmussen; M Schaechter
Journal:  Mol Microbiol       Date:  1994-11       Impact factor: 3.501

10.  Cell cycle-specific changes in nucleoprotein complexes at a chromosomal replication origin.

Authors:  M R Cassler; J E Grimwade; A C Leonard
Journal:  EMBO J       Date:  1995-12-01       Impact factor: 11.598

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  41 in total

Review 1.  Regulation of DnaA assembly and activity: taking directions from the genome.

Authors:  Alan C Leonard; Julia E Grimwade
Journal:  Annu Rev Microbiol       Date:  2011       Impact factor: 15.500

2.  Localization of acidic phospholipid cardiolipin and DnaA in mycobacteria.

Authors:  Erin Maloney; Sai Chandana Madiraju; Malini Rajagopalan; Murty Madiraju
Journal:  Tuberculosis (Edinb)       Date:  2011-12-03       Impact factor: 3.131

3.  Soj/ParA stalls DNA replication by inhibiting helix formation of the initiator protein DnaA.

Authors:  Graham Scholefield; Jeff Errington; Heath Murray
Journal:  EMBO J       Date:  2012-01-27       Impact factor: 11.598

4.  SeqA blocking of DnaA-oriC interactions ensures staged assembly of the E. coli pre-RC.

Authors:  Christian Nievera; Julien J-C Torgue; Julia E Grimwade; Alan C Leonard
Journal:  Mol Cell       Date:  2006-11-17       Impact factor: 17.970

5.  Multiple origins of replication contribute to a discontinuous pattern of DNA synthesis across the T4 genome during infection.

Authors:  J Rodney Brister; Nancy G Nossal
Journal:  J Mol Biol       Date:  2007-02-09       Impact factor: 5.469

Review 6.  Functional taxonomy of bacterial hyperstructures.

Authors:  Vic Norris; Tanneke den Blaauwen; Armelle Cabin-Flaman; Roy H Doi; Rasika Harshey; Laurent Janniere; Alfonso Jimenez-Sanchez; Ding Jun Jin; Petra Anne Levin; Eugenia Mileykovskaya; Abraham Minsky; Milton Saier; Kirsten Skarstad
Journal:  Microbiol Mol Biol Rev       Date:  2007-03       Impact factor: 11.056

7.  Replication initiator DnaA of Escherichia coli changes its assembly form on the replication origin during the cell cycle.

Authors:  Shingo Nozaki; Hironori Niki; Tohru Ogawa
Journal:  J Bacteriol       Date:  2009-06-05       Impact factor: 3.490

8.  A role for nonessential domain II of initiator protein, DnaA, in replication control.

Authors:  Kathryn L Molt; Vincent A Sutera; Kathryn K Moore; Susan T Lovett
Journal:  Genetics       Date:  2009-06-22       Impact factor: 4.562

Review 9.  Bacterial nucleoid-associated proteins, nucleoid structure and gene expression.

Authors:  Shane C Dillon; Charles J Dorman
Journal:  Nat Rev Microbiol       Date:  2010-02-08       Impact factor: 60.633

10.  Bacterial origin recognition complexes direct assembly of higher-order DnaA oligomeric structures.

Authors:  Diana T Miller; Julia E Grimwade; Thu Betteridge; Tania Rozgaja; Julien J-C Torgue; Alan C Leonard
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-15       Impact factor: 11.205

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