Literature DB >> 9149940

A linkage map of the rat genome derived from three F2 crosses.

M T Bihoreau1, D Gauguier, N Kato, G Hyne, K Lindpaintner, J P Rapp, M R James, G M Lathrop.   

Abstract

We report the construction of a dense linkage map of the rat genome integrating 767 simple sequence length polymorphism markers, combined over three crosses with high rates of polymorphism. F2 populations from WKY x S (n = 159), BN x S (n = 91), and BN x GK (n = 139) were selected and genotyped for combinations of microsatellite markers. The loci define 21 linkage groups corresponding to the 20 rat autosomal chromosomes and the X chromosome. The map spans a genetic length of 1998 cM. This combined linkage map should facilitate the advancement of genetic studies for a wide variety of rat models characterized for complex phenotypes.

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Year:  1997        PMID： 9149940     DOI： 10.1101/gr.7.5.434

Source DB:  PubMed          Journal:  Genome Res        ISSN： 1088-9051            Impact factor:   9.043


  15 in total

Review 1.  Functional genomics in rodent models of hypertension.

Authors:  Martin W McBride; Fadi J Charchar; Delyth Graham; William H Miller; Pamela Strahorn; Fiona J Carr; Anna F Dominiczak
Journal:  J Physiol       Date:  2004-01-01       Impact factor: 5.182

2.  A new framework marker-based linkage map and SDPs for the rat HXB/BXH strain set.

Authors:  Martin Jirout; Drahomíra Krenová; Vladimír Kren; Laura Breen; Michal Pravenec; Nicholas J Schork; Morton P Printz
Journal:  Mamm Genome       Date:  2003-08       Impact factor: 2.957

3.  Chromosomal assignment of nineteen rat microsatellite markers to various chromosomes by linkage analysis.

Authors:  V E Sverdlov; O I Dukhanina; C Choi; M T Bihoreau; H Dene; J P Rapp
Journal:  Mamm Genome       Date:  1998-03       Impact factor: 2.957

4.  Linkage mapping of rat chromosome markers generated from chromosome-sorted DNA.

Authors:  A Y Deng; W H Smith-Mensah; B Hoebee; M Garrett; J P Rapp
Journal:  Mamm Genome       Date:  1998-01       Impact factor: 2.957

5.  Correlation between genetic and cytogenetic maps of the rat.

Authors:  Y Andoh; T Kuramoto; N Yokoi; T Maihara; K Kitada; T Serikawa
Journal:  Mamm Genome       Date:  1998-04       Impact factor: 2.957

6.  Hepatocyte nuclear factor 6: organization and chromosomal assignment of the rat gene and characterization of its promoter.

Authors:  M Rastegar; C Szpirer; G G Rousseau; F P Lemaigre
Journal:  Biochem J       Date:  1998-09-15       Impact factor: 3.857

7.  Integration of the rat recombination and EST maps in the rat genomic sequence and comparative mapping analysis with the mouse genome.

Authors:  Steven P Wilder; Marie-Thérèse Bihoreau; Karène Argoud; Takeshi K Watanabe; Mark Lathrop; Dominique Gauguier
Journal:  Genome Res       Date:  2004-04       Impact factor: 9.043

8.  Serum leptin concentration is linked to chromosomes 2 and 6 in the OLETF rat, an animal model of type 2 diabetes with mild obesity.

Authors:  Tomoe Ogino; Daniel H Moralejo; Hiroyuki Kose; Takahisa Yamada; Kozo Matsumoto
Journal:  Mamm Genome       Date:  2003-12       Impact factor: 2.957

9.  SNP and haplotype mapping for genetic analysis in the rat.

Authors:  Kathrin Saar; Alfred Beck; Marie-Thérèse Bihoreau; Ewan Birney; Denise Brocklebank; Yuan Chen; Edwin Cuppen; Stephanie Demonchy; Joaquin Dopazo; Paul Flicek; Mario Foglio; Asao Fujiyama; Ivo G Gut; Dominique Gauguier; Roderic Guigo; Victor Guryev; Matthias Heinig; Oliver Hummel; Niels Jahn; Sven Klages; Vladimir Kren; Michael Kube; Heiner Kuhl; Takashi Kuramoto; Yoko Kuroki; Doris Lechner; Young-Ae Lee; Nuria Lopez-Bigas; G Mark Lathrop; Tomoji Mashimo; Ignacio Medina; Richard Mott; Giannino Patone; Jeanne-Antide Perrier-Cornet; Matthias Platzer; Michal Pravenec; Richard Reinhardt; Yoshiyuki Sakaki; Markus Schilhabel; Herbert Schulz; Tadao Serikawa; Medya Shikhagaie; Shouji Tatsumoto; Stefan Taudien; Atsushi Toyoda; Birger Voigt; Diana Zelenika; Heike Zimdahl; Norbert Hubner
Journal:  Nat Genet       Date:  2008-05       Impact factor: 38.330

10.  Aryl hydrocarbon receptor nuclear translocator-like (BMAL1) is associated with susceptibility to hypertension and type 2 diabetes.

Authors:  Peng Y Woon; Pamela J Kaisaki; José Bragança; Marie-Thérèse Bihoreau; Jonathan C Levy; Martin Farrall; Dominique Gauguier
Journal:  Proc Natl Acad Sci U S A       Date:  2007-08-29       Impact factor: 11.205
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