Literature DB >> 9146808

Efficient numerical methods for nonlinear-facilitated transport and exchange in a blood-tissue exchange unit.

C A Poulain1, B A Finlayson, J B Bassingthwaighte.   

Abstract

The analysis of experimental data obtained by the multiple-indicator method requires complex mathematical models for which capillary blood-tissue exchange (BTEX) units are the building blocks. This study presents a new, nonlinear, two-region, axially distributed, single capillary, BTEX model. A facilitated transporter model is used to describe mass transfer between plasma and intracellular spaces. To provide fast and accurate solutions, numerical techniques suited to nonlinear convection-dominated problems are implemented. These techniques are the random choice method, an explicit Euler-Lagrange scheme, and the MacCormack method with and without flux correction. The accuracy of the numerical techniques is demonstrated, and their efficiencies are compared. The random choice, Euler-Lagrange and plain MacCormack method are the best numerical techniques for BTEX modeling. However, the random choice and Euler-Lagrange methods are preferred over the MacCormack method because they allow for the derivation of a heuristic criterion that makes the numerical methods stable without degrading their efficiency. Numerical solutions are also used to illustrate some nonlinear behaviors of the model and to show how the new BTEX model can be used to estimate parameters from experimental data.

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Year:  1997        PMID: 9146808      PMCID: PMC3175772          DOI: 10.1007/bf02684194

Source DB:  PubMed          Journal:  Ann Biomed Eng        ISSN: 0090-6964            Impact factor:   3.934


  9 in total

1.  Computationally efficient algorithms for convection-permeation-diffusion models for blood-tissue exchange.

Authors:  J B Bassingthwaighte; I S Chan; C Y Wang
Journal:  Ann Biomed Eng       Date:  1992       Impact factor: 3.934

2.  A linear method for determining liver sinusoidal and extravascular volumes.

Authors:  C A GORESKY
Journal:  Am J Physiol       Date:  1963-04

3.  A Note on the Kinetics of Enzyme Action.

Authors:  G E Briggs; J B Haldane
Journal:  Biochem J       Date:  1925       Impact factor: 3.857

4.  Blood-tissue exchange via transport and transformation by capillary endothelial cells.

Authors:  J B Bassingthwaighte; C Y Wang; I S Chan
Journal:  Circ Res       Date:  1989-10       Impact factor: 17.367

5.  Kinetics of uptake and metabolism by endothelial cell from indicator dilution data.

Authors:  J H Linehan; T A Bronikowski; C A Dawson
Journal:  Ann Biomed Eng       Date:  1987       Impact factor: 3.934

6.  Applications of the lagged normal density curve as a model for arterial dilution curves.

Authors:  J B Bassingthwaighte; F H Ackerman; E H Wood
Journal:  Circ Res       Date:  1966-04       Impact factor: 17.367

7.  SENSOP: a derivative-free solver for nonlinear least squares with sensitivity scaling.

Authors:  I S Chan; A A Goldstein; J B Bassingthwaighte
Journal:  Ann Biomed Eng       Date:  1993 Nov-Dec       Impact factor: 3.934

8.  Lung serotonin uptake kinetics from indicator-dilution and constant-infusion methods.

Authors:  C M Malcorps; C A Dawson; J H Linehan; T A Bronikowski; D A Rickaby; A G Herman; J A Will
Journal:  J Appl Physiol Respir Environ Exerc Physiol       Date:  1984-09

9.  Kinetics of serotonin uptake in the intact lung.

Authors:  C A Dawson; J H Linehan; D A Rickaby; T A Bronikowski
Journal:  Ann Biomed Eng       Date:  1987       Impact factor: 3.934

  9 in total
  7 in total

1.  Advection and diffusion of substances in biological tissues with complex vascular networks.

Authors:  D A Beard; J B Bassingthwaighte
Journal:  Ann Biomed Eng       Date:  2000-03       Impact factor: 3.934

2.  Analysis of nonlinear and nonsteady state hepatic extraction with the dispersion model using the finite difference method.

Authors:  A Hisaka; Y Sugiyama
Journal:  J Pharmacokinet Biopharm       Date:  1998-10

3.  Quantitative evaluation of capacity-limited hepatobiliary transport based on hepatocellular diffusion model by MULTI(FEM).

Authors:  M Higashimori; K Yamaoka; S Fujitani; T Nakagawa
Journal:  J Pharmacokinet Pharmacodyn       Date:  2001-10       Impact factor: 2.745

4.  Analysis of nonlinear hepatic clearance of a cyclopentapeptide, BQ-123, with the multiple indicator dilution method using the dispersion model.

Authors:  A Hisaka; T Nakamura; Y Sugiyama
Journal:  Pharm Res       Date:  1999-01       Impact factor: 4.200

5.  Modeling serotonin uptake in the lung shows endothelial transporters dominate over cleft permeation.

Authors:  Bartholomew Jardine; James B Bassingthwaighte
Journal:  Am J Physiol Lung Cell Mol Physiol       Date:  2013-05-03       Impact factor: 5.464

6.  JSim, an open-source modeling system for data analysis.

Authors:  Erik Butterworth; Bartholomew E Jardine; Gary M Raymond; Maxwell L Neal; James B Bassingthwaighte
Journal:  F1000Res       Date:  2013-12-30

7.  Modeling Fatty Acid Transfer from Artery to Cardiomyocyte.

Authors:  Theo Arts; Robert S Reneman; James B Bassingthwaighte; Ger J van der Vusse
Journal:  PLoS Comput Biol       Date:  2015-12-16       Impact factor: 4.475

  7 in total

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