Literature DB >> 9144169

Characterization and tissue-specific expression of the rat basic fibroblast growth factor antisense mRNA and protein.

R Knee1, A W Li, P R Murphy.   

Abstract

An RNA transcribed from the antisense strand of the FGF-2 gene has been implicated in the regulation of FGF-2 mRNA stability in amphibian oocytes. We have now cloned and characterized a novel 1. 1-kb mRNA (fgf-as) from neonatal rat liver. In non-central nervous system (CNS) tissues the fgf-as RNA is abundantly expressed in a developmentally regulated manner. The FGF-AS cDNA contains a consensus polyadenylylation signal and a long open reading frame (ORF) whose deduced amino acid sequence predicts a 35-kDa protein with homology to the MutT family of nucleotide hydrolases. Western blot analysis with antibodies against the deduced peptide sequence demonstrates that the FGF-AS protein is expressed in a broad range of non-CNS tissue in the postnatal period. In the developing brain, the abundance of sense and antisense transcripts are inversely related, suggesting a role for the antisense RNA in posttranscriptional regulation of FGF-2 expression in this tissue. The FGF-AS is complementary to two widely separated regions in the long 3' untranslated region of the FGF-2 mRNA, in the vicinity of the proximal and distal polyadenylylation sites. These findings demonstrate that the FGF-2 and fgf-as RNAs are coordinately transcribed on a tissue-specific and developmentally regulated basis and suggest that interaction of the sense and antisense RNAs may result in posttranscriptional regulation of FGF-2 in some tissues.

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Year:  1997        PMID: 9144169      PMCID: PMC24610          DOI: 10.1073/pnas.94.10.4943

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  35 in total

1.  Transmembrane helices predicted at 95% accuracy.

Authors:  B Rost; R Casadio; P Fariselli; C Sander
Journal:  Protein Sci       Date:  1995-03       Impact factor: 6.725

2.  The orphan receptor Rev-ErbA alpha activates transcription via a novel response element.

Authors:  H P Harding; M A Lazar
Journal:  Mol Cell Biol       Date:  1993-05       Impact factor: 4.272

3.  A highly conserved sequence motif defining the family of MutT-related proteins from eubacteria, eukaryotes and viruses.

Authors:  E V Koonin
Journal:  Nucleic Acids Res       Date:  1993-10-11       Impact factor: 16.971

4.  Dorsal-ventral differences in Xcad-3 expression in response to FGF-mediated induction in Xenopus.

Authors:  J L Northrop; D Kimelman
Journal:  Dev Biol       Date:  1994-02       Impact factor: 3.582

5.  Expression of alternatively spliced bFGF first coding exons and antisense mRNAs during chicken embryogenesis.

Authors:  A Zúñiga Mejía Borja; C Meijers; R Zeller
Journal:  Dev Biol       Date:  1993-05       Impact factor: 3.582

6.  Hydrolytic elimination of a mutagenic nucleotide, 8-oxodGTP, by human 18-kilodalton protein: sanitization of nucleotide pool.

Authors:  J Y Mo; H Maki; M Sekiguchi
Journal:  Proc Natl Acad Sci U S A       Date:  1992-11-15       Impact factor: 11.205

7.  Basic fibroblast growth factor sense (FGF) and antisense (gfg) RNA transcripts are expressed in unfertilized human oocytes and in differentiated adult tissues.

Authors:  R S Knee; S E Pitcher; P R Murphy
Journal:  Biochem Biophys Res Commun       Date:  1994-11-30       Impact factor: 3.575

8.  PCR detection of the rat brain basic fibroblast growth factor (bFGF) mRNA containing a unique 3' untranslated region.

Authors:  A E el-Husseini; J A Paterson; Y Myal; R P Shiu
Journal:  Biochim Biophys Acta       Date:  1992-07-15

9.  Tissue-specific regulation of basic fibroblast growth factor mRNA levels by diabetes.

Authors:  C W Karpen; R G Spanheimer; A L Randolph; W L Lowe
Journal:  Diabetes       Date:  1992-02       Impact factor: 9.461

10.  Identification and characterization of an antisense RNA transcript (gfg) from the human basic fibroblast growth factor gene.

Authors:  P R Murphy; R S Knee
Journal:  Mol Endocrinol       Date:  1994-07
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  20 in total

1.  RNA editing and regulation of Drosophila 4f-rnp expression by sas-10 antisense readthrough mRNA transcripts.

Authors:  Nick T Peters; Justin A Rohrbach; Brian A Zalewski; Colleen M Byrkett; Jack C Vaughn
Journal:  RNA       Date:  2003-06       Impact factor: 4.942

2.  Antisense transcripts with FANTOM2 clone set and their implications for gene regulation.

Authors:  Hidenori Kiyosawa; Itaru Yamanaka; Naoki Osato; Shinji Kondo; Yoshihide Hayashizaki
Journal:  Genome Res       Date:  2003-06       Impact factor: 9.043

3.  Deletion derivatives of the MuDR regulatory transposon of maize encode antisense transcripts but are not dominant-negative regulators of mutator activities.

Authors:  Soo-Hwan Kim; Virginia Walbot
Journal:  Plant Cell       Date:  2003-09-24       Impact factor: 11.277

Review 4.  Long non-coding RNAs in corticogenesis: deciphering the non-coding code of the brain.

Authors:  Julieta Aprea; Federico Calegari
Journal:  EMBO J       Date:  2015-10-29       Impact factor: 11.598

5.  Translated anti-sense product of the Na/phosphate co-transporter (NaPi-II).

Authors:  B Huelseweh; B Kohl; H Hentschel; R K Kinne; A Werner
Journal:  Biochem J       Date:  1998-06-01       Impact factor: 3.857

6.  Comparative analyses of intracellularly expressed antisense RNAs as inhibitors of human immunodeficiency virus type 1 replication.

Authors:  G Veres; U Junker; J Baker; C Barske; C Kalfoglou; H Ilves; S Escaich; H Kaneshima; E Böhnlein
Journal:  J Virol       Date:  1998-03       Impact factor: 5.103

7.  Chromatin-remodeling factors mediate the balance of sense-antisense transcription at the FGF2 locus.

Authors:  Lori A McEachern; Paul R Murphy
Journal:  Mol Endocrinol       Date:  2014-02-19

Review 8.  Antisense RNA: function and fate of duplex RNA in cells of higher eukaryotes.

Authors:  M Kumar; G G Carmichael
Journal:  Microbiol Mol Biol Rev       Date:  1998-12       Impact factor: 11.056

Review 9.  The fibroblast growth factor family: neuromodulation of affective behavior.

Authors:  Cortney A Turner; Stanley J Watson; Huda Akil
Journal:  Neuron       Date:  2012-10-04       Impact factor: 17.173

10.  Alternative splicing of the FGF antisense gene: differential subcellular localization in human tissues and esophageal adenocarcinoma.

Authors:  Shuo Cheng Zhang; Christie Barclay; Leigh Ann Alexander; Laurette Geldenhuys; Geoffrey A Porter; Alan G Casson; Paul R Murphy
Journal:  J Mol Med (Berl)       Date:  2007-06-14       Impact factor: 4.599

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