Literature DB >> 9122246

A genetic system for Archaea of the genus Methanosarcina: liposome-mediated transformation and construction of shuttle vectors.

W W Metcalf1, J K Zhang, E Apolinario, K R Sowers, R S Wolfe.   

Abstract

New methods that allow, for the first time, genetic analysis in Archaea of the genus Methanosarcina are presented. First, several autonomously replicating plasmid shuttle vectors have been constructed based on the naturally occurring plasmid pC2A from Methanosarcina acetivorans. These vectors replicate in 9 of 11 Methanosarcina strains tested and in Escherichia coli. Second, a highly efficient transformation system based upon introduction of DNA by liposomes has been developed. This method allows transformation frequencies of as high as 2 x 10(8) transformants per microgram of DNA per 10(9) cells or approximately 20% of the recipient population. During the course of this work, the complete 5467-bp DNA sequence of pC2A was determined. The implications of these findings for the future of methanoarchaeal research are also discussed.

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Year:  1997        PMID: 9122246      PMCID: PMC20139          DOI: 10.1073/pnas.94.6.2626

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  23 in total

1.  Conserved sequence motifs in the initiator proteins for rolling circle DNA replication encoded by diverse replicons from eubacteria, eucaryotes and archaebacteria.

Authors:  T V Ilyina; E V Koonin
Journal:  Nucleic Acids Res       Date:  1992-07-11       Impact factor: 16.971

2.  Disaggregation of Methanosarcina spp. and Growth as Single Cells at Elevated Osmolarity.

Authors:  K R Sowers; J E Boone; R P Gunsalus
Journal:  Appl Environ Microbiol       Date:  1993-11       Impact factor: 4.792

3.  Construction of an integration vector for use in the archaebacterium Methanococcus voltae and expression of a eubacterial resistance gene.

Authors:  P Gernhardt; O Possot; M Foglino; L Sibold; A Klein
Journal:  Mol Gen Genet       Date:  1990-04

4.  Transduction in the archaebacterium Methanobacterium thermoautotrophicum Marburg.

Authors:  L Meile; P Abendschein; T Leisinger
Journal:  J Bacteriol       Date:  1990-06       Impact factor: 3.490

5.  Novel regulatory mutants of the phosphate regulon in Escherichia coli K-12.

Authors:  B L Wanner
Journal:  J Mol Biol       Date:  1986-09-05       Impact factor: 5.469

6.  The pMTL nic- cloning vectors. I. Improved pUC polylinker regions to facilitate the use of sonicated DNA for nucleotide sequencing.

Authors:  S P Chambers; S E Prior; D A Barstow; N P Minton
Journal:  Gene       Date:  1988-08-15       Impact factor: 3.688

7.  Method for isolation of auxotrophs in the methanogenic archaebacteria: role of the acetyl-CoA pathway of autotrophic CO2 fixation in Methanococcus maripaludis.

Authors:  J Ladapo; W B Whitman
Journal:  Proc Natl Acad Sci U S A       Date:  1990-08       Impact factor: 11.205

8.  Plasmid DNA from the acetotrophic methanogen Methanosarcina acetivorans.

Authors:  K R Sowers; R P Gunsalus
Journal:  J Bacteriol       Date:  1988-10       Impact factor: 3.490

9.  Analysis of drug resistance in the archaebacterium Methanococcus voltae with respect to potential use in genetic engineering.

Authors:  O Possot; P Gernhardt; A Klein; L Sibold
Journal:  Appl Environ Microbiol       Date:  1988-03       Impact factor: 4.792

10.  The integrase family of site-specific recombinases: regional similarities and global diversity.

Authors:  P Argos; A Landy; K Abremski; J B Egan; E Haggard-Ljungquist; R H Hoess; M L Kahn; B Kalionis; S V Narayana; L S Pierson
Journal:  EMBO J       Date:  1986-02       Impact factor: 11.598

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  95 in total

1.  In situ reverse transcription-PCR for monitoring gene expression in individual Methanosarcina mazei S-6 cells.

Authors:  M Lange; T Tolker-Nielsen; S Molin; B K Ahring
Journal:  Appl Environ Microbiol       Date:  2000-05       Impact factor: 4.792

2.  The genome of M. acetivorans reveals extensive metabolic and physiological diversity.

Authors:  James E Galagan; Chad Nusbaum; Alice Roy; Matthew G Endrizzi; Pendexter Macdonald; Will FitzHugh; Sarah Calvo; Reinhard Engels; Serge Smirnov; Deven Atnoor; Adam Brown; Nicole Allen; Jerome Naylor; Nicole Stange-Thomann; Kurt DeArellano; Robin Johnson; Lauren Linton; Paul McEwan; Kevin McKernan; Jessica Talamas; Andrea Tirrell; Wenjuan Ye; Andrew Zimmer; Robert D Barber; Isaac Cann; David E Graham; David A Grahame; Adam M Guss; Reiner Hedderich; Cheryl Ingram-Smith; H Craig Kuettner; Joseph A Krzycki; John A Leigh; Weixi Li; Jinfeng Liu; Biswarup Mukhopadhyay; John N Reeve; Kerry Smith; Timothy A Springer; Lowell A Umayam; Owen White; Robert H White; Everly Conway de Macario; James G Ferry; Ken F Jarrell; Hua Jing; Alberto J L Macario; Ian Paulsen; Matthew Pritchett; Kevin R Sowers; Ronald V Swanson; Steven H Zinder; Eric Lander; William W Metcalf; Bruce Birren
Journal:  Genome Res       Date:  2002-04       Impact factor: 9.043

Review 3.  Archaea--timeline of the third domain.

Authors:  Ricardo Cavicchioli
Journal:  Nat Rev Microbiol       Date:  2010-12-06       Impact factor: 60.633

4.  Improved and versatile transformation system allowing multiple genetic manipulations of the hyperthermophilic archaeon Thermococcus kodakaraensis.

Authors:  Takaaki Sato; Toshiaki Fukui; Haruyuki Atomi; Tadayuki Imanaka
Journal:  Appl Environ Microbiol       Date:  2005-07       Impact factor: 4.792

5.  Development of a plasmid-mediated reporter system for in vivo monitoring of gene expression in the archaeon Methanosarcina acetivorans.

Authors:  Ethel E Apolinario; Karin M Jackson; Kevin R Sowers
Journal:  Appl Environ Microbiol       Date:  2005-08       Impact factor: 4.792

6.  The archaeon Methanosarcina acetivorans contains a protein disulfide reductase with an iron-sulfur cluster.

Authors:  Daniel J Lessner; James G Ferry
Journal:  J Bacteriol       Date:  2007-08-03       Impact factor: 3.490

7.  Biochemical Characterization of the Methylmercaptopropionate:Cob(I)alamin Methyltransferase from Methanosarcina acetivorans.

Authors:  He Fu; Michelle N Goettge; William W Metcalf
Journal:  J Bacteriol       Date:  2019-05-22       Impact factor: 3.490

8.  Methanol-dependent gene expression demonstrates that methyl-coenzyme M reductase is essential in Methanosarcina acetivorans C2A and allows isolation of mutants with defects in regulation of the methanol utilization pathway.

Authors:  Michael Rother; Paolo Boccazzi; Arpita Bose; Matthew A Pritchett; W W Metcalf
Journal:  J Bacteriol       Date:  2005-08       Impact factor: 3.490

9.  Synthesis of catalytically active form III ribulose 1,5-bisphosphate carboxylase/oxygenase in archaea.

Authors:  Michael W Finn; F Robert Tabita
Journal:  J Bacteriol       Date:  2003-05       Impact factor: 3.490

10.  Functional analysis of the three TATA binding protein homologs in Methanosarcina acetivorans.

Authors:  Matthew J Reichlen; Katsuhiko S Murakami; James G Ferry
Journal:  J Bacteriol       Date:  2010-01-15       Impact factor: 3.490

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