Literature DB >> 911797

Antiproteolytic aldehydes and ketones: substituent and secondary deuterium isotope effects on equilibrium addition of water and other nucleophiles.

C A Lewis, R Wolfenden.   

Abstract

Equilibrium constants for hydration of ketones, in dilute D2O solution at 34 degrees C, observed by proton magnetic resonance under conditions of slow exchange, were acetone 0.002, chloroacetone 0.08, 1,3-dichloroacetone 4.17, bromoacetone 0.07, and 1,3-dibromoacetone (an inhibitor of papain) 1.85. Neither acetamidoacetone nor N,N-diacetylaminoacetone showed evidence of appreciable hydration in dilute aqueous solution, nor was any hydrate detectable in solutions of tosylglycine chloromethyl ketone. Substitution of acetaldehyde with acylamido substituents, as in several potent reversible inhibitors of papain, was found to enhance its equilibrium constant for covalent hydration by an order of magnitude; these inhibitors are about 90% hydrated in dilute aqueous solution, and their affinity for proteases may have been underestimated accordingly. The effects of deuterium substitution at C-1 of acetaldehyde, on equilibrium addition of oxygen and sulfur nucleophiles, are substantial and vary with the nature of the nucleophile. These isotope effects may be useful as a mean of distinguishing between alternative structures of complexes formed between enzymes and aldehydes.

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Year:  1977        PMID: 911797     DOI: 10.1021/bi00641a022

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  10 in total

1.  Binding of the Microbial Cyclic Tetrapeptide Trapoxin A to the Class I Histone Deacetylase HDAC8.

Authors:  Nicholas J Porter; David W Christianson
Journal:  ACS Chem Biol       Date:  2017-08-30       Impact factor: 5.100

2.  Benzyloxycarbonylprolylprolinal, a transition-state analogue for prolyl oligopeptidase, forms a tetrahedral adduct with catalytic serine, not a reactive cysteine.

Authors:  A Kahyaoglu; K Haghjoo; F Kraicsovits; F Jordan; L Polgar
Journal:  Biochem J       Date:  1997-03-15       Impact factor: 3.857

3.  The necessity of magnesium cation for acid assistance aglycone departure in catalysis by Escherichia coli (lacZ) beta-galactosidase.

Authors:  M L Sinnott; S G Withers
Journal:  Biochem J       Date:  1978-11-01       Impact factor: 3.857

4.  Mechanism of the reaction of papain with substrate-derived diazomethyl ketones. Implications for the difference in site specificity of halomethyl ketones for serine proteinases and cysteine proteinases and for stereoelectronic requirements in the papain catalytic mechanism.

Authors:  K Brocklehurst; J P Malthouse
Journal:  Biochem J       Date:  1978-11-01       Impact factor: 3.857

5.  Mechanism of carboxypeptidase A: hydration of a ketonic substrate analogue.

Authors:  D W Christianson; P R David; W N Lipscomb
Journal:  Proc Natl Acad Sci U S A       Date:  1987-03       Impact factor: 11.205

6.  Binding of N8-Acetylspermidine Analogues to Histone Deacetylase 10 Reveals Molecular Strategies for Blocking Polyamine Deacetylation.

Authors:  Corey J Herbst-Gervasoni; David W Christianson
Journal:  Biochemistry       Date:  2019-12-02       Impact factor: 3.162

7.  Chloroacetone as an active-site-directed inhibitor of the aliphatic amidase from Pseudomonas aeruginosa.

Authors:  M R Hollaway; P H Clarke; T Ticho
Journal:  Biochem J       Date:  1980-12-01       Impact factor: 3.857

8.  Complex between carboxypeptidase A and a hydrated ketomethylene substrate analogue.

Authors:  G Shoham; D W Christianson; D A Oren
Journal:  Proc Natl Acad Sci U S A       Date:  1988-02       Impact factor: 11.205

9.  Effects of deuterium substitution alpha and beta to the reaction centre, 18O substitution in the leaving group, and aglycone acidity on hydrolyses of aryl glucosides and glucosyl pyridinium ions by yeast alpha-glucosidase. A probable failure of the antiperiplanar-lone-pair hypothesis in glycosidase catalysis.

Authors:  L Hosie; M L Sinnott
Journal:  Biochem J       Date:  1985-03-01       Impact factor: 3.857

10.  X-ray Crystallographic Snapshots of Substrate Binding in the Active Site of Histone Deacetylase 10.

Authors:  Corey J Herbst-Gervasoni; David W Christianson
Journal:  Biochemistry       Date:  2021-01-15       Impact factor: 3.162

  10 in total

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