Literature DB >> 9115171

An analysis of the metabolic theory of the origin of the genetic code.

R Amirnovin1.   

Abstract

A computer program was used to test Wong's coevolution theory of the genetic code. The codon correlations between the codons of biosynthetically related amino acids in the universal genetic code and in randomly generated genetic codes were compared. It was determined that many codon correlations are also present within random genetic codes and that among the random codes there are always several which have many more correlations than that found in the universal code. Although the number of correlations depends on the choice of biosynthetically related amino acids, the probability of choosing a random genetic code with the same or greater number of codon correlations as the universal genetic code was found to vary from 0.1% to 34% (with respect to a fairly complete listing of related amino acids). Thus, Wong's theory that the genetic code arose by coevolution with the biosynthetic pathways of amino acids, based on codon correlations between biosynthetically related amino acids, is statistical in nature.

Keywords:  NASA Discipline Exobiology; Non-NASA Center

Mesh:

Substances:

Year:  1997        PMID: 9115171     DOI: 10.1007/pl00006170

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  20 in total

1.  RNA-ligand chemistry: a testable source for the genetic code.

Authors:  M Yarus
Journal:  RNA       Date:  2000-04       Impact factor: 4.942

2.  Testing a biosynthetic theory of the genetic code: fact or artifact?

Authors:  T A Ronneberg; L F Landweber; S J Freeland
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-05       Impact factor: 11.205

3.  On the evolution of primitive genetic codes.

Authors:  Günter Weberndorfer; Ivo L Hofacker; Peter F Stadler
Journal:  Orig Life Evol Biosph       Date:  2003-10       Impact factor: 1.950

Review 4.  The case for an error minimizing standard genetic code.

Authors:  Stephen J Freeland; Tao Wu; Nick Keulmann
Journal:  Orig Life Evol Biosph       Date:  2003-10       Impact factor: 1.950

5.  Imprints of the genetic code in the ribosome.

Authors:  David B F Johnson; Lei Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-12       Impact factor: 11.205

6.  Ancestral AlaX editing enzymes for control of genetic code fidelity are not tRNA-specific.

Authors:  Eva Maria Novoa; Oscar Vargas-Rodriguez; Stefanie Lange; Yuki Goto; Hiroaki Suga; Karin Musier-Forsyth; Lluís Ribas de Pouplana
Journal:  J Biol Chem       Date:  2015-02-27       Impact factor: 5.157

7.  Error minimization and coding triplet/binding site associations are independent features of the canonical genetic code.

Authors:  J Gregory Caporaso; Michael Yarus; Rob Knight
Journal:  J Mol Evol       Date:  2005-10-06       Impact factor: 2.395

8.  Evolution of the genetic triplet code via two types of doublet codons.

Authors:  Huan-Lin Wu; Stefan Bagby; Jean M H van den Elsen
Journal:  J Mol Evol       Date:  2005-07-19       Impact factor: 2.395

Review 9.  Optimization models and the structure of the genetic code.

Authors:  J L Jestin; A Kempf
Journal:  J Mol Evol       Date:  2009-10-20       Impact factor: 2.395

10.  Genetic code evolution started with the incorporation of glycine, followed by other small hydrophilic amino acids.

Authors:  Harold S Bernhardt; Wayne M Patrick
Journal:  J Mol Evol       Date:  2014-06-12       Impact factor: 2.395

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