Literature DB >> 9114972

Sequence specific mutagenesis of the major (+)-anti-benzo[a]pyrene diol epoxide-DNA adduct at a mutational hot spot in vitro and in Escherichia coli cells.

C J Hanrahan1, M D Bacolod, R R Vyas, T Liu, N E Geacintov, E L Loechler, A K Basu.   

Abstract

In the supF gene, most (+)-anti-benzo[a]pyrene diol epoxide ((+)-anti-B[a]PDE) mutagenesis hot spots in Escherichia coli are in 5'-GG sequences [Rodriguez and Loechler (1993) Carcinogenesis 14, 373-383]. A major hot spot was detected at G1 in the sequence 5'-GCG1G2-CCAAAG, whereas G2 yielded very few mutants. In order to investigate the details of such sequence context effects of (+)-anti-B[a]PDE mutagenesis, we have constructed 25-mer oligonucleotides and single-stranded M13 genomes containing the above decamer sequence, in which the trans-N2-dG adduct induced by (+)-anti-B[a]PDE [(+)-trans-anti-B[a]P-N2-dG] at G1 or G2 was introduced. In vitro DNA synthesis on the adducted 25-mers was strongly blocked at each site, although the 3'-->5' exonuclease-deficient Klenow fragment could incorporate a nucleotide opposite the adduct in the presence of Mn2+. For both sites purine nucleotides were preferred. The ratio Vmax/K(m) indicated that the efficiency of incorporation of dGTP opposite these sites was very similar, but dATP incorporation opposite the adduct at G1 was five-fold more efficient than that at G2. For each site, further extension beyond the adducted nucleotide was investigated by annealing four different primers, in which only the nucleotide opposite the adducted deoxyguanosine was altered. Significant extension was only observed when deoxyadenosine was located opposite adducted G1. When the M13 genomes containing the (+)-trans-anti-B[a]P-N2-dG were replicated in E. coli, survival of each adducted genome was less than 1% as compared to the unadducted genome. Upon induction of SOS, viability increased 2-6-fold. DNA sequencing showed no base substitutions in the progeny from SOS-uninduced cells, although small deletions in a quasipalindromic sequence occurred with the adduct being located at either site. However, following SOS induction, up to 40% targeted base substitutions were detected when the adduct was located at G1, while approximately 12% of the progeny were mutants with the adduct at G2. Most base substitutions were targeted G-->T transversions. We conclude that (+)-trans-anti-B[a]P-N2-dG is a highly mutagenic and replication blocking lesion. In addition, the biological consequence of this adduct depends on whether it is located at G1 or G2, suggesting that sequence context plays a major role in the mutagenic processing of this adduct.

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Year:  1997        PMID: 9114972     DOI: 10.1021/tx9601925

Source DB:  PubMed          Journal:  Chem Res Toxicol        ISSN: 0893-228X            Impact factor:   3.739


  14 in total

1.  High-fidelity in vivo replication of DNA base shape mimics without Watson-Crick hydrogen bonds.

Authors:  James C Delaney; Paul T Henderson; Sandra A Helquist; Juan C Morales; John M Essigmann; Eric T Kool
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Review 2.  Integrating S-phase checkpoint signaling with trans-lesion synthesis of bulky DNA adducts.

Authors:  Laura R Barkley; Haruo Ohmori; Cyrus Vaziri
Journal:  Cell Biochem Biophys       Date:  2007       Impact factor: 2.194

Review 3.  Biological properties of single chemical-DNA adducts: a twenty year perspective.

Authors:  James C Delaney; John M Essigmann
Journal:  Chem Res Toxicol       Date:  2007-12-12       Impact factor: 3.739

4.  Methylation of cytosine at C5 in a CpG sequence context causes a conformational switch of a benzo[a]pyrene diol epoxide-N2-guanine adduct in DNA from a minor groove alignment to intercalation with base displacement.

Authors:  Na Zhang; Chin Lin; Xuanwei Huang; Aleksandr Kolbanovskiy; Brian E Hingerty; Shantu Amin; Suse Broyde; Nicholas E Geacintov; Dinshaw J Patel
Journal:  J Mol Biol       Date:  2004-12-31       Impact factor: 5.469

5.  Noncovalent interactions of a benzo[a]pyrene diol epoxide with DNA base pairs: insight into the formation of adducts of (+)-BaP DE-2 with DNA.

Authors:  Jacqueline C Hargis; Henry F Schaefer; K N Houk; Steven E Wheeler
Journal:  J Phys Chem A       Date:  2010-02-04       Impact factor: 2.781

6.  Monitoring the conformation of benzo[a]pyrene adducts in the polymerase active site using fluorescence resonance energy transfer.

Authors:  Thomas D Christian; Louis J Romano
Journal:  Biochemistry       Date:  2009-06-16       Impact factor: 3.162

7.  Differential nucleotide excision repair susceptibility of bulky DNA adducts in different sequence contexts: hierarchies of recognition signals.

Authors:  Yuqin Cai; Dinshaw J Patel; Nicholas E Geacintov; Suse Broyde
Journal:  J Mol Biol       Date:  2008-10-11       Impact factor: 5.469

8.  Free energy profiles of base flipping in intercalative polycyclic aromatic hydrocarbon-damaged DNA duplexes: energetic and structural relationships to nucleotide excision repair susceptibility.

Authors:  Yuqin Cai; Han Zheng; Shuang Ding; Konstantin Kropachev; Adam G Schwaid; Yijin Tang; Hong Mu; Shenglong Wang; Nicholas E Geacintov; Yingkai Zhang; Suse Broyde
Journal:  Chem Res Toxicol       Date:  2013-07-02       Impact factor: 3.739

9.  Preferred WMSA catalytic mechanism of the nucleotidyl transfer reaction in human DNA polymerase κ elucidates error-free bypass of a bulky DNA lesion.

Authors:  Lee Lior-Hoffmann; Lihua Wang; Shenglong Wang; Nicholas E Geacintov; Suse Broyde; Yingkai Zhang
Journal:  Nucleic Acids Res       Date:  2012-07-05       Impact factor: 16.971

10.  The N-clasp of human DNA polymerase kappa promotes blockage or error-free bypass of adenine- or guanine-benzo[a]pyrenyl lesions.

Authors:  Lei Jia; Nicholas E Geacintov; Suse Broyde
Journal:  Nucleic Acids Res       Date:  2008-10-17       Impact factor: 16.971

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