Literature DB >> 9103641

Phylogenetic diversity of the deinococci as determined by 16S ribosomal DNA sequence comparison.

F A Rainey1, M F Nobre, P Schumann, E Stackebrandt, M S da Costa.   

Abstract

16S ribosomal DNA (rDNA) sequences were determined for the five species of the genus Deinococcus (Deinococcus erythromyxa, Deinococcus proteolyticus, Deinococcus radiodurans, Deinococcus radiophilus, and Deinococcus radiopugnans) and the single species of the genus. Deinobacter (Deinobacter grandis). With the exception of Deinococcus erythromyxa, the deinococci form a coherent phylogenetic cluster which is related to the Thermus-Meiothermus lineage. An analysis of the 16S rDNA sequence of Deinococcus erythromyxa revealed that this organism is an actinomycete and a member of the genus Kocuria. Deinobacter grandis falls within the radiation of the genus Deinococcus and phylogenetically can be considered a member of this genus. The results of the phylogenetic analyses are consistent with chemotaxonomic data. On the basis of our data, Deinobacter grandis is transferred to the genus Deinococcus as Deinococcus grandis comb. nov., the description of the genus Deinococcus is emended accordingly, and Deinococcus erythromyxa is transferred to the genus Kocuria as Kocuria erythromyxa comb. nov. The description of the family Deinococcaceae is emended to include organisms with rod-shaped cells, and a set of 16S rDNA signature nucleotides is designated for this group. On the basis of the distinct phylogenetic position of the Deinococcus lineage and a set of 16S rDNA signature nucleotides, the order Deinococcales ord. nov. is described.

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Year:  1997        PMID: 9103641     DOI: 10.1099/00207713-47-2-510

Source DB:  PubMed          Journal:  Int J Syst Bacteriol        ISSN: 0020-7713


  21 in total

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Review 2.  Genome of the extremely radiation-resistant bacterium Deinococcus radiodurans viewed from the perspective of comparative genomics.

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3.  Deinococcus sedimenti sp. nov. isolated from river sediment.

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Journal:  J Microbiol       Date:  2016-11-26       Impact factor: 3.422

4.  Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes.

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5.  The LexA protein from Deinococcus radiodurans is not involved in RecA induction following gamma irradiation.

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6.  Experimental Evolution of Extreme Resistance to Ionizing Radiation in Escherichia coli after 50 Cycles of Selection.

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8.  Distinctive protein signatures provide molecular markers and evidence for the monophyletic nature of the deinococcus-thermus phylum.

Authors:  Emma Griffiths; Radhey S Gupta
Journal:  J Bacteriol       Date:  2004-05       Impact factor: 3.490

9.  Iso-superoxide dismutase in Deinococcus grandis, a UV resistant bacterium.

Authors:  Na-Rae Yun; Young Nam Lee
Journal:  J Microbiol       Date:  2009-05-02       Impact factor: 3.422

10.  Regulation of MntH by a dual Mn(II)- and Fe(II)-dependent transcriptional repressor (DR2539) in Deinococcus radiodurans.

Authors:  Hongxing Sun; Mingfeng Li; Guangzhi Xu; Huan Chen; Jiandong Jiao; Bing Tian; Liangyan Wang; Yuejin Hua
Journal:  PLoS One       Date:  2012-04-16       Impact factor: 3.240

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